Gene PHATR_10251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10251 
Symbol 
ID7204208 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp676983 
End bp678046 
Gene Length1064 bp 
Protein Length306 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186107 
Protein GI219113047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0349969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATA ATAAGACGGA TTTGACAAAG CCCCACGAAT GGTACCCGCA TGCGCGCTTG 
AATCGGCGAA AAGTAATTTA CCACGGAGGT CCGACGAACT CTGGGAAAAC GTATGAAGCG
TTGGAACGCC TCAAGCTAGC CAACAAGGGG ATGTACTTAG GACCGTTGCG ATTGTTGGCG
GCTGAAATTT ATGAAAAGCT TACTGCCGCA GGCGTCTATT GCAATCTATA CACGGGTCAG
GAGCGTCGAG AGATTCCGTT TGCTACGCAT GGCGCGGCTA CTGTTGAGAT GGCTTCAGTT
GTTGACGATT TCGACGTGGT GGTCATTGAT GAAATTCAGA TGATAGAAGA CCAGGAGAGA
GGATTTGCAT GGACGAGAGC CTTACTGGGC TCTCGGGCAA AAGAAATACA TGTCTGTGGA
GGGCTCGAAG CGAAAGAGAT CGTTGAGCGA ATCGCAAAAG CATGTGGTGA TGACTTTGAG
CTTCGAACGT ACAAACGATT CGCTGAACTC AAGGTCTCCG TCCAATGTCT TGCAAAAAGC
TTGAAAGACG TCAATAGCTA CAAGAATGTT CAGGCTGGTG ACTGTATAGT TGCCTTCAGT
CGCAACGGTA AGTGCAGGAA AAGCGACCTT TTGTGAATCG AGAAATGTCA CCTCTTACAG
AATGTTGTCC GTTGCAGATA TTTTTGCAAT CAAACGAGAG ATAGAAACCG CTACAAGCTA
CAAATGCTGC GTTATTTATG GCTCGCTCCC TCCAGAGACA AGATCGGAGC AAGCGCGTCG
CTTTAATAAC CCTAATTCTG GCTATGACAT TCTTGTGGCT TCGTAAGTAA ACCGACGAAC
TTCGGCAACA CCTCTGTGAA ATACCCTGAG CCTTCTCACA TTTTTGTTTT GGCTTCAGTG
ATGCTATTGC AATGGGATTG AATCTTAGCA TTCGGCGTAT CATTTTTAAC TCGATGTACA
AGCATGACGG AACAGGGATC GTCAGACTTG GCCACTCTGC AGTCAAGCAA ATAAGTGGAC
GGGCTGGACG AAGAAACAGT CTTTATCCTT TTGGAGAAGT AAGT
 
Protein sequence
MLDNKTDLTK PHEWYPHARL NRRKVIYHGG PTNSGKTYEA LERLKLANKG MYLGPLRLLA 
AEIYEKLTAA GVYCNLYTGQ ERREIPFATH GAATVEMASV VDDFDVVVID EIQMIEDQER
GFAWTRALLG SRAKEIHVCG GLEAKEIVER IAKACGDDFE LRTYKRFAEL KVSVQCLAKS
LKDVNSYKNV QAGDCIVAFS RNDIFAIKRE IETATSYKCC VIYGSLPPET RSEQARRFNN
PNSGYDILVA SDAIAMGLNL SIRRIIFNSM YKHDGTGIVR LGHSAVKQIS GRAGRRNSLY
PFGEVS