Gene PHATRDRAFT_9984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_9984 
Symbol 
ID7197284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand+ 
Start bp1440304 
End bp1441053 
Gene Length750 bp 
Protein Length249 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177833 
Protein GI219112163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0507609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTGTATCGT CAACCGAAGT TGAAAAGTTT AGCGGCATGG ATGAGACATG GTGGGACGCT 
CGCAAAAACC CATTGTTGCC AATGAATGCC GTCCGCATTC GCTACATTGG AGATCAACTA 
GCCAGAAACC AGCAGCAACT GCAGACGACG CACTTAGTAT CGGCTTTGGA GGGCAAGACG 
GTATTAGATA TTGGATGTGG CGGAGGGCTT TTATCAGAGA GTTTGGCCCG ACTTGGTGCC 
ACGGTGACTG CCATTGACCC TTCACAGCGT CTGGTAGATG CGGCACGGCT TCACGGCCAA 
CTGGATCGGC GAACACGAAA TATAAACTAT TTGGGGAATA CCACGGCTGA AGACCTGTCC 
CAGACTGGTG ATAAATTCGA CGTTGTCTGC CTTTTGGAAG TCATTGAGCA CGCGACTGAT 
CCGGATTCTT TAGTAGAAGC TGCGGCGTCG ATGGTGAAGC CCGGTGGATA CCTGTTTCTT 
TCCACCCTAA ACAAAACGAT CAAAAGTTAT CTGCTCACGA TTGTTGGTGC GGAATATATA 
ATGGGATACA TACCTCCCGG TACGCATGAT TGGAAGCAAT ACTTGTCGCC TGCCCAAGTA 
GGCGAAATGA CATCTAGAAA CGGACTTCGC CCAGTCGATG TTTCTGGGTT GGTACTCCAC 
CAACCGCCCA TGTTTGGAAA GTGGGATTGG CGATTGGATT CAACGAATGT CGAGGTCAAC 
TGGATCGCGA CTTACGAGAA AGAGAACTAA
 
Protein sequence
SVSSTEVEKF SGMDETWWDA RKNPLLPMNA VRIRYIGDQL ARNQQQLQTT HLVSALEGKT 
VLDIGCGGGL LSESLARLGA TVTAIDPSQR LVDAARLHGQ LDRRTRNINY LGNTTAEDLS 
QTGDKFDVVC LLEVIEHATD PDSLVEAAAS MVKPGGYLFL STLNKTIKSY LLTIVGAEYI 
MGYIPPGTHD WKQYLSPAQV GEMTSRNGLR PVDVSGLVLH QPPMFGKWDW RLDSTNVEVN 
WIATYEKEN