| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43775 |
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| Symbol | |
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| ID | 7197049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 1438326 |
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| End bp | 1439683 |
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| Gene Length | 1358 bp |
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| Protein Length | 415 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178143 |
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| Protein GI | 219112783 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00573239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTACCTCTC CAGTTTTGTT TTCCCGGCCT GGCGTTATTA TCATTGGATT GACTGTGAGC
GTACATACCT ATCTCGTGCA CAAGACACTG AGCGTTACCC AAAGCAGACC ATGATCGAGC
TAGAAGACCT CCCACTGGCA CAAAGCGTCT CAAAAGCCGA CGATGGCTAC GAACAGGGGT
TCGACGACGA AGAGCCGCAG GACTCGCACG CCGCCCTGGT GGACACGGTC CGTGGCAACG
GCAAGGAACA CCGCGACGCG CTGGCGTACC TGCTGCGCTA CGAAACCATG GTCCGTCAGC
AAGAAGCGGA AGACATGGCA ACCTTATCCC ACATTCGTCC CTGCGTCGAG CGTCTCCAAG
AACTGGCGGG AATCGAAAAC GCCCAGAAGT CCTACGCGAC CTGGTCGGAC ACAACGGCGG
ATGTTCTCAC CGATGTAGTC TCGTTTGCCC AGCTCAAAAC GGCTCTCGAC AATCTTGAGT
GCAGCACCGG TACCGAGTTC TTGGCAACGG ATCGTCAGCT GATGATGGTA CTCCGTATGC
TGACCTCCAA GACTACAGAA ATGGATGCCG ATGTCAAGAT TACTTGGGCC GAGTTTCTCC
AATGCTACAA AACGTGCATT GTGGGAATGA TGACGTTACA GCACTTGTCC TCCTCGGACG
ACCGATCCCG TGCGCGTGAT CGGACCCTTT CTATGCTGAG TCTTTTTGAG CCACCTTCCA
CGAAACTTTT CAATGAAGAT CGTCACATTG ATAGCCGTGC CCTGACCGCC GAGCGTGCTC
GTCGCCCGGG GGTTCCCATG CTACTGCAGC GACGGACGCT TCGCAGCAGT AAACGTTCAA
AGCAACTCGT GGCTGGAATT TTGCTAATTC TGGCCAGTGT TGCCGGTTTA GCTTTTCATA
TCTCTATGTC TTCCGGTATC CAAACAAATC CTTTACGCAG CAAAATCGAT ACGATCGGGG
AACAAGATAA TTCGCCGCCA CCCATGATGT CTCCTGCATT GCCCTCCTCC TCCTTCACCA
CCAGTCCCTT AGTAATGCCG GAAACGGCAA ACTTGAAAGT CGAAAACCTT CCTGAAGCAA
CCCTGGCGTT CGCCACGGTA GACTTCTTCC ACCCCGGCTC ACCCGATCAT TACGAGCCTG
CCGTGGAGAG CATGACGTTT CCCGTGCTTG TCGGTGGAAT GGTTGGGCTA GTAGGTGCCC
CCTTGGCTGT GACGGGACTG CAAATTCTGA AGACAGGGTT GTCAGCTGGA AGCATTGTTT
CATCGAGTAT TTTTGTAGCC GGCCTAGCAT CCATGGCTTC TTTTTCAGTT AGAGGTTTCT
TTGCCGTCCT CTCCAAGCTC CTACGTAAGA ACGTCTGA
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| Protein sequence | MIELEDLPLA QSVSKADDGY EQGFDDEEPQ DSHAALVDTV RGNGKEHRDA LAYLLRYETM
VRQQEAEDMA TLSHIRPCVE RLQELAGIEN AQKSYATWSD TTADVLTDVV SFAQLKTALD
NLECSTGTEF LATDRQLMMV LRMLTSKTTE MDADVKITWA EFLQCYKTCI VGMMTLQHLS
SSDDRSRARD RTLSMLSLFE PPSTKLFNED RHIDSRALTA ERARRPGVPM LLQRRTLRSS
KRSKQLVAGI LLILASVAGL AFHISMSSGI QTNPLRSKID TIGEQDNSPP PMMSPALPSS
SFTTSPLVMP ETANLKVENL PEATLAFATV DFFHPGSPDH YEPAVESMTF PVLVGGMVGL
VGAPLAVTGL QILKTGLSAG SIVSSSIFVA GLASMASFSV RGFFAVLSKL LRKNV
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