| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43680 |
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| Symbol | |
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| ID | 7197450 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 1171917 |
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| End bp | 1177675 |
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| Gene Length | 5759 bp |
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| Protein Length | 1458 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178091 |
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| Protein GI | 219112679 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.16765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGGGT TTGGCAGCAG TTTTGGCAGT CCGGCTCCTG GTGGTCCAGC CTCTGGACCT
TCTTTATTTG GCGCGAGCAG TAGCACACCG AACAACAGCG CGACGGCGGG TCACACACAA
TCCAACAACA CCGGATTTGG CGCCTCGACG TCACCGCCAG CTTTTGGCGC ACCCGTTTCC
TTCGCTCCCA CTGTCGCATT TGCAGCTCCC GCTCCGGCTC TCGCCGCGCC TCTCTTTGGT
AGCCCAACTT CTGTTTTCGG AAGTAGCAAT GGACCCGCCC AAGGGTTTGC GATGAGTACT
GGCTTTGGAA GCTCGGCCTC ACCAGCACCT TTTGGCAGCT CACTCTCCGC ACTTCCGTTC
GGATCAATAC AGCAACCTTC AGCGGCAGCC ACTGTGTTCG CGTCAGGCGG TTTTGGAACT
GGTAATAGTT CAGCTGCATT TGGACCTATT TCCTCACCGG CACCATCTGC GTTTGGATCG
AACCAAAATA CTGCGTCTAT GTACGGATCT GCAGGAAGTG CTAATTTATC GTTTGGGCCT
ACTTCAATCA CGAACTTTGG ATCTGCTAGT AGCAATCCTT TCGGCGGTCC GCCACGGCAA
GCCCCTTCTT CAGATGCCTA TAATTCTTTG TCGGCTACGC CTTTCGCGAC GTCATCAATG
TCGACACCCT TTGGATCGAC GGCTCCGACC CAAAGTACAG GTACGCCCTT TGGAAGTAGC
ACCAATGCTA TGGTGAATCC TTTTACTTCA ATCTCCACTA CTGCACCCAA CGGATCGACG
GTTCCGACCC AAAGTACAGT TACGCCCTTT GGAAGTAGCA CCAATGCTAT GGTGAATCCT
TTTACTTCAA TCTCCACTAC TGCACCCACC ATATCGATGT CTTTTGGTGC GTCCACCAAT
CTTGCTTGCA ACAATGATCT AGAAATGGAA AGCAGTAGTC CGACGCCGCA CGGCATGTCA
CCAATCATGG GATCTCCAAT TCATTCAGCA TCTGACAGCG AAGATATGGC CGACGCCGGA
GGAGGCAATA ACGCGTCAGC CTTTTCCAGC AGCAACGCAC CCTTTGGAAA GCCCATATTT
TCTTCTACAA CAAAAAGTGG ATGGCCCGCT CCGGCGCCAT TCGGCGGAGG AGCGCTTGGG
ACTATTCCGG AATCTGCGTC CACGTTCCCG CCCTCAATGA TGACCAGCGC CGGGGAAGTT
GCTCCGAGTT CGGTTTACAC GGAATCCGCA GATTCCTTAA CCAGCAATGC AGATGACAAT
CGATTGGCGG AACTCAAAGC ACGCATTGAA GAAAAGAAGC GTATGCTGTT GGAAAAGAAG
AAGCGGGAAG CCGAAACATC TTCTACAACG ACCGCTTTGA ATGCGGATGC ACCCTCATTT
GTTCCGGAGT CGACAAGCAC GAACGTACAA AGCGCTCTAT CCAAAAAGGC AATCTTGTCT
CTTAGCGAAG ATCGGTCGCC GGCACCTCGC AGTCGAAGTA CCAGCCCGAT ACCACCGATC
AACATTTCGT CTCTCTCAGA TCGCAACGCA CTTCGGTTTA CTGGAAGTCA TAATGGGAGA
TCTCACATGC CAGCTGATCT ACAATCCAAG TCAGAAGAAG CTCCAAACTA CGCGGCACTT
CGTACGGATC CACAAGGAGG TCGTGCAGAT TTAGGATCGG CTGTTTCTAT GGTTGGCACG
TGTCCGTACA TGTGTCCCGA CGAAGAGCTC CTTCGCCGAG AAAGAGAGGG GGACATTCAG
CTTCTAGAGA CCCCACAGCC GGGAACGTTG CACCCAGAAT CATGGACGTA TCGTGACACC
GTCGTTAAGC GCTTTCGAAG ATCAGCCGCC GATTACAAGC TGGATGTACC TGAATGGGTG
CGTCCTCCTG ATGTCCTGGA GCGTGTTTGC TCGTATCTGG AAGAATGGAT TATGGTAAGA
TAAAAAGTTG GCAGCGTAAG GCGACATAGG CTACCGTCCG ACACCTTGCT TTCAATGAAA
TTTCAGGAAA AAGATCGACA AGGACCAGAC CAGCGCTTTC CTCAGGGAGG TGTGCCCCCG
TCGCTCGATG TCTACCAATT TATCTGGGAC CGCACAAGAA TGATACGGAA AGATTTCATC
TTGCAAAATT ATGTTGGAAC AGGAGGCGCT TGTGACGCCC GGGCTGTACG ATGCCACGAA
CGGATAGCAA GATGGCACGC AATGTGTGAG CACCAATTGA GTCATATCTC AGAGTACGTG
TCCCATCAAA GTCAGCAGAA TATTCAGGAG CTCGGTCAGA CGATGAAAAC TCTAAATCAA
TACTACGATG ACTCTCTTAA GCGATCCCTC ATCGAAGTAC CTGATGCACA GGGCAACGAG
ACAAGGCTTA ACTTACTTGG CCAAGCACAC GGATGTGAAT CCAATTCTGT GCAAGGTCCC
AACCCTGTTG ACTATGATGG GACTCCTTTG TCGAATGACG AAGATACGAG TCGGGTATCC
CTTCGGGTTA TTGGCGGTGA TGTATCGCGT AGCTCGATGC ATGGTACTGC CGAACCCGAA
ATGCGTGGAT TGTATATTCT CCTTACAATC GACAACGACG GAGGAATGGA AGTCCTCAAG
TATGCTGCGT GGCTTTTTCG AGAACGTCCT TATATCTATC AATCGCAGCC AGTCCAACTC
GCTATGACCA TCTACAAGGT AAAACTTTTA AATACATTTA TTGGAATTTG ACCAATGTCT
TACCTCACGA CTTGCGCTTT CTCGCCTCAG GCAAAGCGAG AGTTTAATTA CGCTCGTTTC
TTTTCCATTT TGCGATCATC ATCGACTCCA TATCTATTTG CGTGCATCAT GTTTAAACAT
GTTCAAGTGA TGCGCAAGAA TGCATTCCAA ATCATGTCAA AAACGTTCGG AGTCCGTAGT
TCTGCAACTG AAGCTATCTA CGATGCCTAT CCATTAAGGG ACTTGATGAG ACTGTTGTGT
TTTGAGGACA TAGAGGAAGC TAGAAATGCA TGCCAACACT ACAACATTAC CTGCAAAGAA
ATGAAGATAA AAACGTCTGC TAGTGGTACT CGTATTGAGG ATATCGTGTT TTGGAGAGCA
ACGAAATTTA GAGTACCCAC AGATGCCGAG AAGGGAACAA TTGTTCAGCT ACGACCCAAA
AAGATGATCA AGACCATTGA AAGCAAGTTA AATGGAGCCA CCCGACTAGC CGTTTGCAGA
GGAGAAGTGA GTGCTTTTGG GGCATCGCCT ACAGACAGAG AATTCCCTCT TGTTTCGGCT
CAGAGTCAAA ATGTTGCTTT GAAGGAAGAC ACTGTAAAGA GAAATTCAGG AGAGGAGGTA
GCTTCGTTAG CAGCAAGGAA GCAAGAAATT GAACGCCAGC AGCAAGAAGA ACTTGAAAAA
CGACAACAAA TCGAAAGACG TAGACTTGAC GAAGAACGGA TACGCCATGA AGCCGAAAGG
GAACAACGCA TTTCGTTAGA GCTTAAACGC CAGGACATGG AGTCGAAGCA ACGTGAGATA
GAGCTTCGGC AGCAACAAGC GAAGGAGCGG ATAGAATTGG AGCGCCTGCA AAAAGAAGAG
GTGGAGCAGC AAAGAAAGCT TGAAGAGGAA GCTGAGCGAA AAGCGCGAGA CGAAGAGGTC
CGAAGGCAGC TCGAGTTGGA GAGACTTGAG AAAACTCGGC GCGAGGAGCT CAAGCGCCTC
GACGAAGAAG CCCGGAAACG AGAGGAGGTT GAAAAACAGA GGTTACAGCG AGAGGCAGAA
GAAGCAGAGG CTCGCAGGCA AGAGGAGGCG GCTCGACAGA AAAAGCTGGC GCTTGAAAAG
GAAAAGGAAC GACAGCAGTG CGAGGAAAAA GCGCGTTTAA ATGATGTTCG ATGGCGAGAG
CAAACTGAAG AGGCAAAAAA AATTCTTTTA TGGAAACGAT GGAAGCAAAA ACTTCCCAAG
TATTTGGAAA ACGCGGAAGA GACCGCGCGA ATGTTGCAAC ATTTGAGCCC CACCTCGTCA
GCCTCCCTGA AACTTGTGAA GCTTCTTCAC GGAGCCACTA CATTTCATTC GCATCAACCT
GCTTCTCTGC TTCGCCACAA ATTTTCCTAT CCGCCTGATT TGCGAATGGT TCTTGAAAAT
CTTCTCAACC AAGACACCAA ACAAATTAAT CTGTCGTCAG GCATTGCTGA ATCATTATCT
CGGATATGGC GTTGTTCAAG GTTGGACAAT TCTTGTCAAA AATGTTTTTT ATTCAAGATC
GGAGTCTTGT GTCCACAGTC AAAATCAATT CGCCTACAAA GTCTTTCAGA ATTACTGAAA
GCTTGGCTCC AAACTGTTCT TAGCTTTCAC AAAATACACG AGACATCAAC AACTTTCGTA
AACGTCAGGG TGGTTGTTAC TGACAGCAAC CATTCGAAAA TGGATGATTG CGATTGTGTC
TTGGTGGTGG TTCCTGTTAT GTTTTCGATA GGCGAGGAGC TTTTGCGCCT CAAAGGTTTG
TCTTCTACGA TTGGCCGAAC CGTGCCGCGA GTTGTCCTCG GTCTTACGGA CAATTTTGAT
CGGGCCTGTG TGGACGACAT GAATCGTCGC TTGGATGATA CGTTTTCATC TTTATCCAAC
AATATCACTT TAGTCAATAA TGCTGAACTA TCACTAGAAG ATGTACGCGG TGCTTTGCAT
TGTGCCTGCG AACAAATTGC ACAACGAATT ACGGAAGAAG CTCCAGTGGT TATTCAAAGG
ATGACTCCCG AGCAAGTTGC GTGCAAGTGC ATATCGGACG CTATCTCACA ATCTGGTCCT
ACCGAGAAGC GCGATAAAAT CGTCGAACTA GCACAAGCAG CTCTCATCAT AATGATCGAA
GAGATGGAAG ACGTGGCGGC AGAAAGAGAA AGGGCTCCTT CTTGGCCGGC ATCTGAGTTT
GCGAACGACA GCGGCCGCGT TTTGCATTAC TTTGGCCGAG GCGAACACTT GCCGCTGCTT
TGGTCTTCGA CCTTGTCCTT AGGAAACGTA GAATCCCGGT TGACTCCTAT GTCGACTGTT
TTGAATGGTT CTTTGCCTGA TGCATTGGAG CAGTTGCTCC GCGGGGCACC GGAACAGATT
CTTTACGAAT GCCACACTTT GCTGGACAAG AGGTTGTTTC GGCAATGCCT ACAGCAGTCT
CTCTTTTGGT TCAGAGACGC TATACATCCC TGCACCAGCG AGTCTTTTCT GTATTTCGCC
CCGGGCGACG TAGATTGTAT TGCTCAAGCA ACCGGTATTC GGCTCCGAAA CCTTGTGGAA
CGAGAAAACT CGATTTGCTT CGAAGCGAAC GAAGGAAAAG ATGATGTACG GGAAAATGAC
CTGTTTGCGG AAGTTATCGA CTCGCCGTTG GAGTTTGACG GTGAAGCACA ATTAGCGTTG
GGGAGCGCCA CCGAGACACC GACTCCACCG GCATCTCCCG AAGTCACAAA GACGACGCCT
AAGCGGGCGT TGAGTGATGC AAGCATACAG CCGATCGATT CCGTGGAAGC CGGCTCGTTT
GCAAAGCAAA CACCGGGTGC GGTTCCGACT CCACAGTCCC TATCGTACGG CACGTCCCCG
AAGCGTGCCC GTCAGACGAG TGTGGCGACG ACATCACTCG TCGCTGTCTC GAGCGATGTT
ATGCACAGCC GTAAGTGGAC GGAACGATTG GAAGCGTTGG CGTCAGGTGA CGTGATGGCG
GACATGATTG TGGGCCAGTA TATGTTGTCG GCGCTCGTAC AAGATGCTCC GCCTCTGACG
AAAGAATAGT AGGACTAGTT GGAGAGTGTA ACGAGTTTAG CAATAAGCAA CGTTACTCT
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| Protein sequence | MSGFGSSFGS PAPGGPASGP SLFGASSSTP NNSATAGHTQ SNNTGFGAST SPPAFGAPVS
FAPTVAFAAP APALAAPLFG SPTSVFGNRS PAPRSRSTSP IPPINISSLS DRNALRFTGS
HNGRSHMPAD LQSKSEEAPN YAALRTDPQG GRADLGSAVS MVGTCPYMCP DEELLRRERE
GDIQLLETPQ PGTLHPESWT YRDTVVKRFR RSAADYKLDV PEWVRPPDVL ERVCSYLEEW
IMEKDRQGPD QRFPQGGVPP SLDVYQFIWD RTRMIRKDFI LQNYVGTGGA CDARAVRCHE
RIARWHAMCE HQLSHISEYV SHQSQQNIQE LGQTMKTLNQ YYDDSLKRSL IEVPDAQGNE
TRLNLLGQAH GCESNSVQGP NPVDYDGTPL SNDEDTSRVS LRVIGGDVSR SSMHGTAEPE
MRGLYILLTI DNDGGMEVLK YAAWLFRERP YIYQSQPVQL AMTIYKAKRE FNYARFFSIL
RSSSTPYLFA CIMFKHVQVM RKNAFQIMSK TFGVRSSATE AIYDAYPLRD LMRLLCFEDI
EEARNACQHY NITCKEMKIK TSASGTRIED IVFWRATKFR VPTDAEKGTI VQLRPKKMIK
TIESKLNGAT RLAVCRGEVS AFGASPTDRE FPLVSAQSQN VALKEDTVKR NSGEEVASLA
ARKQEIERQQ QEELEKRQQI ERRRLDEERI RHEAEREQRI SLELKRQDME SKQREIELRQ
QQAKERIELE RLQKEEVEQQ RKLEEEAERK ARDEEVRRQL ELERLEKTRR EELKRLDEEA
RKREEVEKQR LQREAEEAEA RRQEEAARQK KLALEKEKER QQCEEKARLN DVRWREQTEE
AKKILLWKRW KQKLPKYLEN AEETARMLQH LSPTSSASLK LVKLLHGATT FHSHQPASLL
RHKFSYPPDL RMVLENLLNQ DTKQINLSSG IAESLSRIWR CSRLDNSCQK CFLFKIGVLC
PQSKSIRLQS LSELLKAWLQ TVLSFHKIHE TSTTFVNVRV VVTDSNHSKM DDCDCVLVVV
PVMFSIGEEL LRLKGLSSTI GRTVPRVVLG LTDNFDRACV DDMNRRLDDT FSSLSNNITL
VNNAELSLED VRGALHCACE QIAQRITEEA PVVIQRMTPE QVACKCISDA ISQSGPTEKR
DKIVELAQAA LIIMIEEMED VAAERERAPS WPASEFANDS GRVLHYFGRG EHLPLLWSST
LSLGNVESRL TPMSTVLNGS LPDALEQLLR GAPEQILYEC HTLLDKRLFR QCLQQSLFWF
RDAIHPCTSE SFLYFAPGDV DCIAQATGIR LRNLVERENS ICFEANEGKD DVRENDLFAE
VIDSPLEFDG EAQLALGSAT ETPTPPASPE VTKTTPKRAL SDASIQPIDS VEAGSFAKQT
PGAVPTPQSL SYGTSPKRAR QTSVATTSLV AVSSDVMHSR KWTERLEALA SGDVMADMIV
GQYMLSALVQ DAPPLTKE
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