Gene PHATRDRAFT_43503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43503 
Symbol 
ID7197195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp653568 
End bp654868 
Gene Length1301 bp 
Protein Length338 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177977 
Protein GI219112451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGTTCTTT ATTATCTTGA CCGTTACAAT ACATTCGCAA AAGACACAAA TATACACACG 
TTCAACGACA AATACCCCAC GATACCGCTT CGTCAGCAGA CAAGTATTCG GATTGGGTTG
CGGTTGCGTG GTCATCCGAA TCCATCCGCG ACGTCGTCAG CCTTGCAAAA GCACGACTCG
CGAACATCCC TACGTCTATC CATCACATTG CTGCAAACAG CCTAGCCCAA CATTGTGGCA
TATCCGGAAT TCGTTCTTTT TACATCCAAA AGAGTATCAC CAAGATGATA CATATCACCT
CTAGAATCGT GTGTGTAGGA TTCCTCGTGG GGCTATCGAT AGCATCAGGA TCGGCCTTTG
CACCGCTGAA GACAAGGTAC CAGCCTCGTA TTGCGCCGGC ACGGCAACAC GTGTGGACGA
CGACGTCGAC ACCAACGATT CGGTTTTCTA GTTGGGTATT GGCGTACGAT GCAATGGAGT
CATACCAATG GAAGTTTAGT GCCAACAATA CATTCGGGTT TCGCGATGAC GGCATTACAG
TCGAGCGCCT CACACCGCCA GCAACCATGG TATGGGATCG TCCAACCACT ACCGACGTGG
CCCAGAGAAG GAAAAGACCA GCCCCTGTAA AACAAGATTC CCGAGAATTC CGCGTCTTTT
GCGATTTGGA TGGAGTCTTG GTTGATTTCG AATCTGGCAT TCGCCGGGTC TTTCCTAACG
AACCCAACAT TCATCACGTT ACCGATGTTC GTCGGGTTGA TATGTGGCGC CGCTTGGAAG
CGTCGGGACC TTTTTTCGAA ACGTTGCCGT GGACGAACCA GGGCAAGGCC TTGTGGAAGC
TGATACAGCC CCTGCGGCCG GATATCCTCA CGGGAGTACC GGCGCACCAG TCCTCGCGCA
CCGAAAAGTA CGCCTGGTGT GCCCGCGAAC TGGGCATTCC GGTCGAACAC GTCGATCGCG
CCGGGCGTTT TCATTCTCAT TCGCCGTCAC CGACGATAAT GTCACGTAAA GGTAACATCA
ACCAAGTCGA AGACGACGAC TCACCGAGGA GTTGCCGGGT CATAACATGC TGGTCCTTCA
ATAAGCACTA CGAAAGTGGA CCCAACGCGG TCCTCATTGA TGATCGGGAA TCTCTACGGG
AGGCTTGGGA ACGAAAGGGC GGTATTTTTA TTCATCACGA TGGAAGTTTG CACCGGACGG
TGGCACAGCT CGTTGATCAT GGAATCCTGA CTCCGGAGCA AATACCACAC GATATTGGCG
TTGCGTGGGA GGACGACGAC GAAAACGTCT TGCGTCCGTA A
 
Protein sequence
MIHITSRIVC VGFLVGLSIA SGSAFAPLKT RYQPRIAPAR QHVWTTTSTP TIRFSSWVLA 
YDAMESYQWK FSANNTFGFR DDGITVERLT PPATMVWDRP TTTDVAQRRK RPAPVKQDSR
EFRVFCDLDG VLVDFESGIR RVFPNEPNIH HVTDVRRVDM WRRLEASGPF FETLPWTNQG
KALWKLIQPL RPDILTGVPA HQSSRTEKYA WCARELGIPV EHVDRAGRFH SHSPSPTIMS
RKGNINQVED DDSPRSCRVI TCWSFNKHYE SGPNAVLIDD RESLREAWER KGGIFIHHDG
SLHRTVAQLV DHGILTPEQI PHDIGVAWED DDENVLRP