| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43473 |
|---|
| Symbol | |
|---|
| ID | 7197177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 555260 |
|---|
| End bp | 556597 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177639 |
|---|
| Protein GI | 219111775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCACTAACAA CGACGGACTA AACCATGAAA TCTTCACCCA CGAATCTACC GTTTGAAGTG
GCCCAGATAA TTGCGTCGTT CGTTGCTGAG GGTTCCACCT TGATACGTTT GGGGGCCGTC
AGTAGAGTGT TCGCCGAAGC CTGCGGAGAA GAAGCAACGT GGGAGCGTCT CTATCGCAAT
GTATGGTGGA ACATTCCTCG CCAACACACC CTTTCCTACC GCTCCGACTA TGCCAGGCGC
TTCGTATTGG ATCGATCCGT ATTCCAACAA CTACAACGGA TAGCGGCATG CTTGCGACGG
ACCTGCCCGA ATCAAATCCG CGACGTTGAC TTGATACGCT TACTACAACG CGACAAAAGT
TGGTTGCATC TCATTAACAA CGACGAGTAT GCCGAGTGCA TGACAGTGCC TCGCGGTATG
GCACTGCACC AGTACACTGG AGATCTATGT GACCAATACA CCACTTGCGT GGCTTCTATA
ACCTTGGAGT ACTTTACTCT TGCCTACATT TCGAGGGAAT GGAATTACTG GCTGCAACAA
AGCAACAGAA ACTCTCCAAC TCATGACAGC ATTTGTTTGG AAGAAGGTGC CTTCTTGCTG
GCATTTTCCT TGTTTGATTG GGAAAAAAGC TTGAATACTC GCCCAGATCT AGCACGTCTT
GACATGTTTC GTCGTTTGGA CGAGTTGGCG TTGCAACTCC AGAGTCGAAT AGGCTTGGAA
ACAACAGCAT CCGAAGACCC TGTTGGCGCT ACCACTAAGC TTAGCGAGCT TTTGCGAGAT
CTTGGGTACG GTGGAAACGT GGAAAACTAC TATGATTTGA ACAATTCCTC CTTATTGTTT
ATATTGGAAA ACCGCAAAGG GATTCCCATT ACGCTGGCGG TACTGTACAA ATGCGTCCTT
CGGCGGGTGG GTGTATTCGT CGACATTATT GGGCTTCCGG GACACGTCGT TTTGGGAATT
TCTACAAACG AGATTTTTGT CGATGTTTTC TGTGGGGGTC AAGTTCTATC TGTGCAGAAC
TGCCGGGAAA TTGTTGACCA ATACCACGTT GAATGGACTG ACCAATTCTT AGCACCGGTG
ACTGCTTCAA ATGTACTCTT ACGAATGACT AATAATATGT TACACTGTAT GCATCGAAGG
TTGGCGGGCC ACCTTGGCGA ATTACAGTCT TTCGAGATAT CAGAAGTTCA ATCGAGGATT
CAGTTCCTGA GAAAGTGTCT CCTGAGGTTC CAAGGCGATG GCATAGAGGA GTACGACGAT
ACGGACGAGC TTGGCGTAAG GAAGTTTCAG TTTGAAAATA GATACACGCT TCACAGTTTT
GCTTCACAGT TTGATTAA
|
|---|
| Protein sequence | MKSSPTNLPF EVAQIIASFV AEGSTLIRLG AVSRVFAEAC GEEATWERLY RNVWWNIPRQ
HTLSYRSDYA RRFVLDRSVF QQLQRIAACL RRTCPNQIRD VDLIRLLQRD KSWLHLINND
EYAECMTVPR GMALHQYTGD LCDQYTTCVA SITLEYFTLA YISREWNYWL QQSNRNSPTH
DSICLEEGAF LLAFSLFDWE KSLNTRPDLA RLDMFRRLDE LALQLQSRIG LETTASEDPV
GATTKLSELL RDLGYGGNVE NYYDLNNSSL LFILENRKGI PITLAVLYKC VLRRVGVFVD
IIGLPGHVVL GISTNEIFVD VFCGGQVLSV QNCREIVDQY HVEWTDQFLA PVTASNVLLR
MTNNMLHCMH RRLAGHLGEL QSFEISEVQS RIQFLRKCLL RFQGDGIEEY DDTDELGVRK
FQFENRYTLH SFASQFD
|
|---|
| |