Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43430 |
Symbol | |
ID | 7197152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 444539 |
End bp | 445116 |
Gene Length | 578 bp |
Protein Length | 184 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177617 |
Protein GI | 219111731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00586531 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCATGAAAG ACACGAACGC GCCCTGGACG CACGTTGAGT TCGAGACGTC CATTGGTTCC TTCAGCATCG AACTGTACCA CAAGCATACA CCGCGCACGT GTTACAACAT TGCCGCTCTG GCGTACCAAG GCTACTACAA TGGCACCATT TTCCACCGCA TTATTCGTGA TTTCATGATC CAAGGTGGCG ACCCCACAGG AACGGGACGC GGTGGGGAAT CTATCTACGG GGGAAAGTTT GCCGACGAAA TCACGCGCAA CCTTAAACAC GTGGGTGCCG GGGTCGTTTC CATGGCCAAT GCCGGTCCCA ACACGAATGG ATCGCAATTT TTTATTTCCC TTAAACCCAC CCCCTTTTTG GACGGAAAGC ATACCGTGTT GGGTCGGGTG TATTCCGGTA TGAGTGTTGT GCAGCGCATG GGGATGGTAG CGACGGACGG AGAGGATCGG CCGCTGCATC CTGTGACGAT CTATACCGCT ACACCGTTGC GGGAACCGCC GCTACCCAAG TCGGAACGAA ACACCGAAAC GACTTCTTTG CAAATAAAAG CTAGCTAGAC CAGGGCTACT TGCTGACT
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Protein sequence | MKDTNAPWTH VEFETSIGSF SIELYHKHTP RTCYNIAALA YQGYYNGTIF HRIIRDFMIQ GGDPTGTGRG GESIYGGKFA DEITRNLKHV GAGVVSMANA GPNTNGSQFF ISLKPTPFLD GKHTVLGRVY SGMSVVQRMG MVATDGEDRP LHPVTIYTAT PLREPPLPKS ERNTETTSLQ IKAS
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