| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43422 |
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| Symbol | |
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| ID | 7197433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 417546 |
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| End bp | 420279 |
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| Gene Length | 2734 bp |
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| Protein Length | 836 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177928 |
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| Protein GI | 219112353 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.293567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACGGTGTC AACGGTCTCG AATATTGGAA GTGATTTTGG AGAGAACACC TACCGACACA
TTCACACACA CGTTGGTCGA CACATACACA CACCTCCACG GTCCTCTAGA CACACACACA
CACACACACA CATACTGGTG TTTGAACGCG GTCCATTTCC GTCTCACGCA CCTCCTGACT
ATCCATCGAT ACGGCTCTTG TCTCGAAACG AATTCGTTCG TCGATGAGTT CTCCCCGCAC
TCCGGCAAGC TTGCGTTCGT CGCACAACGT CTGGTATCCG CGTTTCCGCG AACGCTCGAC
CCTTCCCCAC GGGCACGGTC CCCGTCCTAC CAAAGCGACT CTTCCCGCAT CGTCCACACT
CCAAACCACG TCGCCGTCTT CACAGAAACC CCGGACCCTG CGATCCCTAC ACCGCCACAA
CAGTCCAACG ATGACTACCT CCATCACAAC AACGACTGCC ACGACGACTA CGCTTCCCCC
TCACCCTCCC GTGCGTCGCG TGGTGAACTC CTCCTTGCGT GACGGCAAGC CTCCCCGCGT
GTCCCCCACG TCCCCTGCCT GGATGTCCGA CTCCACGGGG GGCGCCCCGC GACCCCCACT
CGTCGCCACA CTCAACAACA AGGGCGTCGA GTTTCTACAA AGACAACAGT ACGAACAGGC
ACACCAGAGT TTCTCCAAAG CCCTCCTCTT GCTGCAACAA CAACAGTCAC CGCCGCTTGC
TCCCACGCGC CACAAGAAAC CCAAGGCTAC CGAGGAAAGG CACTCCTCGC CGGAACTTGA
ACTCGGGTTG TCTCTGCAAT GTTCCCTGGA ACCGCTCGTC TTGCCCGACA CTTCCTCGTC
GCCTCGACGA GTCCAAACCA CCGCCACGGC AATCAAGCAC CGTGCCGAAT ACGACGAAGG
GATGGGCGTC TTTCAGGCAC CCTTACAACT CGGGCAGTCC TCGTACTCCG ACGACACGAA
CAGTAATGAG CACCCGCGGG GAACACGCAA CGAACCCGCC ACCATTCTCT TTAATCTCGC
TCGTGTATAT CATCAGCAGG ATCATCTCGA TCAAGCTCTC GGATGTTACC GACGCGCCTT
GGTATCGCTG CACGACGACA GTCATCACAA CGATATCTAC CTGACTTTGG CGATTCTGTT
TGGCATTGGA CACATCCAAT ACATGCGTGG CGATCACGCG GATTCGTTAC AGACCTACCG
TACCAGTCTG CGTTTGGCCC GTACGCTGGG CAAGGAGAGT GTACCCGTCG CGGCCTGTCT
CAACTGCATC GGCGTTCTCC ACTACGTTAT GCACGATGGT GACGTCCCCA CGGCTCTGGA
AAGCCTGCAA ACATCCATAC GGATACGCAC CAGCCAACTG GGGAAATTAC ACGCCGACGT
GGGGACGACG TGGAACAACC TCGGACGCGT ATACTTTCAA CAAGGCCGTT ACGGCCCGGC
CATGAAGGCC TACCGTCAAT CGCTCGCGAT TCGACGCTCC GCCCACGGAG ATTCCGTCGA
TGTCGCCGCA ACATTGTTCA ATATCGGACA ATGCTACCAT CAAGAAGGAC ACAAGGACAA
GGCCTTGCGG CATTATCAAG AATTCCTCAA ACTCGCCACG CACTATTTTG GAAAGGCGCA
CCGCGATATC TGTATCGTGA CGACCTGTAT CGGACAGGTC CTCCACGAAC AAAAGGAATT
CAACAAGGCC CTCAAGGCCT TTCGACAAGC CCTACGCGTG GGACGGGCCG CCCTTGGTAC
CGTGCACGCC GAAATCGCCA TTACCTTGAA TAAACTAGGC AACCTGCACT ACGAAACGGG
AGACCTGGAC GGCGCACTCA AAGCCTACCA TCAAGGGCTG CGGGTGGAGC TGGCTGTCCT
CGAACCTGGC AATCCCAATG TATGCGTCAC GTACACTAAC ATTGCCGAAA TTCACAAACA
ACGAGGCGAA TTCGCCCAAG CCTTGACGCA TTACGACAAG GTACTGCGGT TGCAACGTCG
CCACTCCTGT GATCCACTCG AAATTGCCAA TACGCTGAGT AGTATTGGCT ACGTACGGCA
TCAAAAGGGA GACTACCAAC GTGCCATGGA CGTGAATCAG GAGTGTTTGC GAATTCGGCG
GGAAATCAAG GGGGATGTCG ACGAAGAAGT GGCGTCCACG TTGACTCACA TTGCCTTGGT
CTTGCTTAAG CTAGAATCAC ACGACATGGC TCTCCAAGTC TTGTCGGAAG CCTACCGCAT
TCGCTCCTTG CTGAGCAATG GACGGTCGTC GGGCGCCAAT ACCGAGGCCA AACCCACGCG
GGACATTGCC TTTACGCTGT ACAATATTGC ACTCATTCAT CACCAACAAG GTTCACACGA
ACAGGCTCTC CAATTTTATC TGGAGACGGC GCGGGTTGAA AAGGCCGCGC TCGGTGAAGC
GCACAGGGAC TTGTCTATTA CGGCCTACAA CATTGCGCAA GTCTACTACC AACGTGGCGA
CATGGATTTA GCCGTCGACT ACTTTACCGA AGCCTTGCGA ATTGAGAGGC TTTGTTTTGG
ACCGGATCAT GTAACGTGCG CCCGGACCTT GAACGAAATT GGTAACATTG AACTGCAAAG
GGGTAATTTG GACGCCATGC TGGGGTGCTA CACGCAAGCA TTGCGGATAT ATCGACACCA
CCACGGGGCG GTCGGTGACG AGCACTTGGT GATCTACGGA CGGTCCTTGT GGAGATTTGA
AGTGGTCCAA CCCGCGGCGG CCGGGATGGC CTAA
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| Protein sequence | MSSPRTPASL RSSHNVWYPR FRERSTLPHG HGPRPTKATL PASSTLQTTS PSSQKPRTLR
SLHRHNSPTM TTSITTTTAT TTTLPPHPPV RRVVNSSLRD GKPPRVSPTS PAWMSDSTGG
APRPPLVATL NNKGVEFLQR QQYEQAHQSF SKALLLLQQQ QSPPLAPTRH KKPKATEERH
SSPELELGLS LQCSLEPLVL PDTSSSPRRV QTTATAIKHR AEYDEGMGVF QAPLQLGQSS
YSDDTNSNEH PRGTRNEPAT ILFNLARVYH QQDHLDQALG CYRRALVSLH DDSHHNDIYL
TLAILFGIGH IQYMRGDHAD SLQTYRTSLR LARTLGKESV PVAACLNCIG VLHYVMHDGD
VPTALESLQT SIRIRTSQLG KLHADVGTTW NNLGRVYFQQ GRYGPAMKAY RQSLAIRRSA
HGDSVDVAAT LFNIGQCYHQ EGHKDKALRH YQEFLKLATH YFGKAHRDIC IVTTCIGQVL
HEQKEFNKAL KAFRQALRVG RAALGTVHAE IAITLNKLGN LHYETGDLDG ALKAYHQGLR
VELAVLEPGN PNVCVTYTNI AEIHKQRGEF AQALTHYDKV LRLQRRHSCD PLEIANTLSS
IGYVRHQKGD YQRAMDVNQE CLRIRREIKG DVDEEVASTL THIALVLLKL ESHDMALQVL
SEAYRIRSLL SNGRSSGANT EAKPTRDIAF TLYNIALIHH QQGSHEQALQ FYLETARVEK
AALGEAHRDL SITAYNIAQV YYQRGDMDLA VDYFTEALRI ERLCFGPDHV TCARTLNEIG
NIELQRGNLD AMLGCYTQAL RIYRHHHGAV GDEHLVIYGR SLWRFEVVQP AAAGMA
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