Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_25433 |
Symbol | |
ID | 7197359 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 1093559 |
End bp | 1095496 |
Gene Length | 1938 bp |
Protein Length | 360 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178071 |
Protein GI | 219112639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAACTTTTTG CGACGTCGTT CCCACTCTGA CCCTTTTCTC GCGTTCATCT TCTTTCTTCT TCATCATCAT GTGGCGTATC CCTTCCATCA CACTCCTCTT TCTCACCGCT TCCGGCGCTA CCCGTGTTGA AAGCGAGGCC AGCTTGTCGG TAGAACTGAT GAGCAAGTTT AAGGGATGGG TGGATTTTCA CCAAAAGATG TACGACTCAC ACGACAACAA GATGGAACGT CTAAATATCT GGTTGAACAA TGATGGTACG TACCTGAATC AGCATATGGA ATAGTTAGTT GGGGATCAGA GTGGAAAAGC GTCAGCACTC TCGTGCGCCG TCTCTTTGCC TCCATGGCGT CCAGTTCTGT TTCTAGGGCC ATATTTTTGA CGTCAGAAAT TTCAGATTCC GTTGAACACG TAGCATCCCA CGGCGAATTT CATAAGCAAC GGAATGTTCT GTCAATATCT CATAAATTCC TACACGCACT CACTCACCCG TTTCTATTCG ACATCTCTCG CAAACAGAAC GGATCGAAGC GCACAATAAC CAAAATCCGA CTCCCTCGTT CGCCCTCGGG CACAATGAAT TCTCCGACAT GACGGAAGAC GAGTTTGCTC AGTACTTTCG TTTGGGTCCT TACGCAAGCG TTCGACAAAA GGAGGCGGCG CAGGCCAAAA TTATGGACCC CGACCAGCAA ATCTCAACCG CAGAGCGTCG ACGTTTGTGG GAAGAACAAG CTCCTTTGAC CCTTCCAGAC TACATGAATT GGGTTCAAGC GGGGGCGGTG ACTCCAATGA AGAATCAGGG GGCCTGCGGT TCCTGCTGGG CATTTTCCAC GACTGGTGCC TTGGAAGGAG CCAAGTTTCT CAAGACTGGC GAGTTGGTGG CGCTGTCCGA ACAACACTTA ATTGACTGCG ATAAGGTTGA TCTGGGATGC AATGGCGGAC TCATGGACAA CGCCTTCAAG TTTGACATGT CAGAAGCAGG CCTCTGCTCG GAAGAGGAAT ATCCTTACCT GGCGAAACAG AGCCGAACTT GTATGACGAA CTGCACCAAG GTGGAAGGTA GCGGGGTTAA GACGTTCATC GATGTCCCGC CAGGCGATGA AAAAGCCCTT CTTTCAGCGA TTGCGATGCA ACCCATCAGT GTAGCGATTC AGGCTTCGCA ATTTGTCTTC CAGTTTTACA AGAATGGTGT GCTGACCGAC GATTCCTGTG GTAGCCGCGC CAGTATTGAT CACGGTGTAC TGGCGGTTGG ATATGGAACG GATGTCGACA CGAACGAGCC TTACTTCCTT GTCAAGAATT CGTAAGTTGA AAAGAGTCTT CGAGTGTGTG TGTTTGTGCG CACGACTTGA AAACGAGAAC ACTAATGTTG CTCTATCCTT CTATAGCTGG GGCGAGACAT GGGGCGACAA GGGCTATGTG AAGCTCGGCC GTGGTGGGAA GAACGAGTTT GGAATGTGCG CTATTCTGAA GATGGCTAGC TTTCCGGTGG TGGAGTAAAG AAGGCCGAAT AAATTCTTTT CTGCTACCAT CGCTTGTTGT CGACATACGA TGGTTAACCA GTTAATACCT CATTTCATCG TTTATGCAAT AGTGGGAGAC TTCAGTGTGC CTCAGGAGTT GCAGGTCGAT GGAATTCTTA AAAGGGCCTT TTGGGTCAGA GGCTCTATAC CGAGTGATGA TGCCGCCATT GCAAAAACTT CCAGCGCTAA CAAGGCTCAC TCTTAGCGTC TATAGAATGC AATTTGAAGG ATAGCTCTCG TGTGGGACAA CCTGCAGTGG ATTTGCGAGG ATGAACTGCT CGTCACACCG ATCGATTTTT CTGCCGCTCA TTGTCAGTTC ATCGCTGGAT GCCCGGCGCA AGCATAATTT TCGGAAATTG TAACCACCAG CCTGTTCAGC TCGGCCCAGC CTTTACACGT AGCGCAATCT CGAAAATA
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Protein sequence | MWRIPSITLL FLTASGATRV ESEASLSVEL MSKFKGWVDF HQKMYDSHDN KMERLNIWLN NDERIEAHNN QNPTPSFALG HNEFSDMTED EFAQYFRLGP YASVRQKEAA QAKIMDPDQQ ISTAERRRLW EEQAPLTLPD YMNWVQAGAV TPMKNQGACG SCWAFSTTGA LEGAKFLKTG ELVALSEQHL IDCDKVDLGC NGGLMDNAFK FDMSEAGLCS EEEYPYLAKQ SRTCMTNCTK VEGSGVKTFI DVPPGDEKAL LSAIAMQPIS VAIQASQFVF QFYKNGVLTD DSCGSRASID HGVLAVGYGT DVDTNEPYFL VKNSWGETWG DKGYVKLGRG GKNEFGMCAI LKMASFPVVE
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