Gene PHATRDRAFT_25433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_25433 
Symbol 
ID7197359 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1093559 
End bp1095496 
Gene Length1938 bp 
Protein Length360 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178071 
Protein GI219112639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACTTTTTG CGACGTCGTT CCCACTCTGA CCCTTTTCTC GCGTTCATCT TCTTTCTTCT 
TCATCATCAT GTGGCGTATC CCTTCCATCA CACTCCTCTT TCTCACCGCT TCCGGCGCTA
CCCGTGTTGA AAGCGAGGCC AGCTTGTCGG TAGAACTGAT GAGCAAGTTT AAGGGATGGG
TGGATTTTCA CCAAAAGATG TACGACTCAC ACGACAACAA GATGGAACGT CTAAATATCT
GGTTGAACAA TGATGGTACG TACCTGAATC AGCATATGGA ATAGTTAGTT GGGGATCAGA
GTGGAAAAGC GTCAGCACTC TCGTGCGCCG TCTCTTTGCC TCCATGGCGT CCAGTTCTGT
TTCTAGGGCC ATATTTTTGA CGTCAGAAAT TTCAGATTCC GTTGAACACG TAGCATCCCA
CGGCGAATTT CATAAGCAAC GGAATGTTCT GTCAATATCT CATAAATTCC TACACGCACT
CACTCACCCG TTTCTATTCG ACATCTCTCG CAAACAGAAC GGATCGAAGC GCACAATAAC
CAAAATCCGA CTCCCTCGTT CGCCCTCGGG CACAATGAAT TCTCCGACAT GACGGAAGAC
GAGTTTGCTC AGTACTTTCG TTTGGGTCCT TACGCAAGCG TTCGACAAAA GGAGGCGGCG
CAGGCCAAAA TTATGGACCC CGACCAGCAA ATCTCAACCG CAGAGCGTCG ACGTTTGTGG
GAAGAACAAG CTCCTTTGAC CCTTCCAGAC TACATGAATT GGGTTCAAGC GGGGGCGGTG
ACTCCAATGA AGAATCAGGG GGCCTGCGGT TCCTGCTGGG CATTTTCCAC GACTGGTGCC
TTGGAAGGAG CCAAGTTTCT CAAGACTGGC GAGTTGGTGG CGCTGTCCGA ACAACACTTA
ATTGACTGCG ATAAGGTTGA TCTGGGATGC AATGGCGGAC TCATGGACAA CGCCTTCAAG
TTTGACATGT CAGAAGCAGG CCTCTGCTCG GAAGAGGAAT ATCCTTACCT GGCGAAACAG
AGCCGAACTT GTATGACGAA CTGCACCAAG GTGGAAGGTA GCGGGGTTAA GACGTTCATC
GATGTCCCGC CAGGCGATGA AAAAGCCCTT CTTTCAGCGA TTGCGATGCA ACCCATCAGT
GTAGCGATTC AGGCTTCGCA ATTTGTCTTC CAGTTTTACA AGAATGGTGT GCTGACCGAC
GATTCCTGTG GTAGCCGCGC CAGTATTGAT CACGGTGTAC TGGCGGTTGG ATATGGAACG
GATGTCGACA CGAACGAGCC TTACTTCCTT GTCAAGAATT CGTAAGTTGA AAAGAGTCTT
CGAGTGTGTG TGTTTGTGCG CACGACTTGA AAACGAGAAC ACTAATGTTG CTCTATCCTT
CTATAGCTGG GGCGAGACAT GGGGCGACAA GGGCTATGTG AAGCTCGGCC GTGGTGGGAA
GAACGAGTTT GGAATGTGCG CTATTCTGAA GATGGCTAGC TTTCCGGTGG TGGAGTAAAG
AAGGCCGAAT AAATTCTTTT CTGCTACCAT CGCTTGTTGT CGACATACGA TGGTTAACCA
GTTAATACCT CATTTCATCG TTTATGCAAT AGTGGGAGAC TTCAGTGTGC CTCAGGAGTT
GCAGGTCGAT GGAATTCTTA AAAGGGCCTT TTGGGTCAGA GGCTCTATAC CGAGTGATGA
TGCCGCCATT GCAAAAACTT CCAGCGCTAA CAAGGCTCAC TCTTAGCGTC TATAGAATGC
AATTTGAAGG ATAGCTCTCG TGTGGGACAA CCTGCAGTGG ATTTGCGAGG ATGAACTGCT
CGTCACACCG ATCGATTTTT CTGCCGCTCA TTGTCAGTTC ATCGCTGGAT GCCCGGCGCA
AGCATAATTT TCGGAAATTG TAACCACCAG CCTGTTCAGC TCGGCCCAGC CTTTACACGT
AGCGCAATCT CGAAAATA
 
Protein sequence
MWRIPSITLL FLTASGATRV ESEASLSVEL MSKFKGWVDF HQKMYDSHDN KMERLNIWLN 
NDERIEAHNN QNPTPSFALG HNEFSDMTED EFAQYFRLGP YASVRQKEAA QAKIMDPDQQ
ISTAERRRLW EEQAPLTLPD YMNWVQAGAV TPMKNQGACG SCWAFSTTGA LEGAKFLKTG
ELVALSEQHL IDCDKVDLGC NGGLMDNAFK FDMSEAGLCS EEEYPYLAKQ SRTCMTNCTK
VEGSGVKTFI DVPPGDEKAL LSAIAMQPIS VAIQASQFVF QFYKNGVLTD DSCGSRASID
HGVLAVGYGT DVDTNEPYFL VKNSWGETWG DKGYVKLGRG GKNEFGMCAI LKMASFPVVE