Gene PHATRDRAFT_25133 details

Gene Information

• Locus tag: PHATRDRAFT_25133
• ID: 7197060
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 14354
• End bp: 16444
• Gene Length: 2091 bp
• Protein Length: 562 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002177845
• Protein GI: 219112187

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCAGGAAGC CGCGTGCCCA AGCGAACGAA GGAACCGCTT TACCAGTACA CTATCAAACG 
CGAGCACTGT TACCATGGCC AAGACAGGAT GGAAGTCGGG GATCTCCAAT ACTTCCTCAG 
CGGGAAAAAC CAATCGGACT CCCAAGGGAA ATGCGAGTTC CAAACTCACG CAAGGCCGAC 
GCCGCGACAA GCAACCCGGG TCGGAGCGTT CCGCGGAAAC AATCCAGCGT TTGAAAATGT 
ATTCCAATGG AAAAGCCATT CGTAACAAGG CGGGGAAGAT TGTGGCGGGA ACCTTTATGA 
TGCAAGACCG CGCCGGTGAT CGAAAAATCG AAGCCTCCAC TGGACGCATA CAACCCGATC 
GCCGATGGTT CGGGAATACG CGCGTGGTTG GTGCCACCGA ACTCGATCGT TTTCGTCAAG 
AAATGACGGA GAAAGTGGCT GATCCATACT CCGTAGTCCT TAAACGCAAA AAGCTGCCAA 
TGGGCCTCTT ACAGGATGCC GCCGAGTACA AGGCCGGAAA CCAGAAAGCC GCGCTTTTAG 
AACAAGAGCC GTTCGATCAA GCATTTGGAA AGAATTCTCG TCGAAAGAGA GTCAAACTTG 
ATCAGCTTTT CGTACAACGC GCGGCTGAAT CGGCAGACAG CAAAGAAGAC ATCAAGACTG 
GCGAAGGAGA GGCTATAGTA GTGTTGTCCA ATACGGAACA TGAGCCTTCC GCCTACTCGT 
CGCTCTTAGA AACGGCACAG AAGAGCCAAG GAACGTATCA ACAAGTCAAC ACTCGTGAGG 
GTATCGTTCC CTGGGGCCGA GACTCACACT TGGAGCGCTC CGAAGGCGAG GGCATTGACT 
GGCGGCATGA GAAGAAAGAC GATCTCTTCC TTAAGGGACA ATCAAAACGA ATTTGGGGAG 
AGTTCTTTAA AGTCGTGGAT TGTTCAGATG TTGTTTTGCA TATCATTGAT GCTCGAAATG 
TACCGGGTAC CCGCTGTACC ATGATTGAAC GTCATATCGC CAAAAATGCT TCTCACAAGC 
ACTTGGTCTT TGTTTTGAAC AAGATCGATC TCGTGCCGAA CTGGGTTGCC AAGCGATGGA 
TGGGCGAGTT GGCTGCCGTT CGTCCAACCA TCGCCTTTCA TGCATCACTA ACAAATGCGT 
TTGGAAAAGG GGCCTTAATA AGCTTACTAC GACAGTTTGG AAAGCTTCAC GAAGACAAAA 
AGCAAATCAG TGTTGGTGTT ATTGGCTATC CCAATGTTGG CAAATCGTCG GTCATCAATA 
CACTCATTTC AAAAAAATCT TGCAAAGTGG CACCCATTCC TGGTGAAACC AAAATCTGGC 
AGTATGTTAC CCTCTTCAAA CGAATATCCC TTATCGACTG TCCCGGTGTT GTTGTCGATA 
CAGCTGGTGA TACGGAAGAG GATTCCGTGC TCAAGGGAGT GGTTCGAGCG GAGCGCTTGG 
AAAATCCAGA GGACTTTATC GATGCGATTA TGGGCAAGGT GAAACGTGAG CACATTGCGG 
CACAATACAA GCTACCAAAG GATGGAGAGG AGACATGGAG TAGTAGCGGA GAGCTTATGG 
AAATGATCGC GAGGCGATCA GGTCGTTTGC TAAAGGGTGG TGACCCCTGT ATTCGGACTG 
CGGCACTTAT GATTATCAAC GATTTCCAAC GGGGCCGTCT CCCCCATTTT ATTCCTCCAC 
CTGAGCTTAA GGTAGAGGAA GATCAGAAGA CAGTTGCTAC TGAGCAGGCA ATCCAAATCG 
AGGAGCAGAA TCTGGATGAT GTGGTTGTTG TCGAGAAAGA AATGGAACAA GACGAAGAAG 
GTGTCGAAAC TAAAACGAAT GATCATGCAG CCATTGCTGA CACGGAGACA GTAATTGACA 
CTTCGAGTAT CTTGATCGGA GACGGTAAAT GGGACGAATA GTGTGGTTTT AAAGATACTC 
GCTTGAGAGA TAGGATTGGT CTGAAAACAT AATTTTGCTT GAAAACTCAA CGTAACAAAT 
TCATTGCGTT CGAACGGTCC ACACATGTTT GAGACTTTGA ACAAAAAGGG GCTTAGTATT 
AACTTTCTTA ATGGAGGTAC GCCAAGACGT TGCTGGAAAT TTTTCTCTCT C 

 

Protein sequence

MAKTGWKSGI SNTSSAGKTN RTPKGNASSK LTQGRRRDKQ PGSERSAETI QRLKMYSNGK 
AIRNKAGKIV AGTFMMQDRA GDRKIEASTG RIQPDRRWFG NTRVVGATEL DRFRQEMTEK 
VADPYSVVLK RKKLPMGLLQ DAAEYKAGNQ KAALLEQEPF DQAFGKNSRR KRVKLDQLFV 
QRAAESADSK EDIKTGEGEA IRSEGEGIDW RHEKKDDLFL KGQSKRIWGE FFKVVDCSDV 
VLHIIDARNV PGTRCTMIER HIAKNASHKH LVFVLNKIDL VPNWVAKRWM GELAAVRPTI 
AFHASLTNAF GKGALISLLR QFGKLHEDKK QISVGVIGYP NVGKSSVINT LISKKSCKVA 
PIPGETKIWQ YVTLFKRISL IDCPGVVVDT AGDTEEDSVL KGVVRAERLE NPEDFIDAIM 
GKVKREHIAA QYKLPKDGEE TWSSSGELME MIARRSGRLL KGGDPCIRTA ALMIINDFQR 
GRLPHFIPPP ELKVEEDQKT VATEQAIQIE EQNLDDVVVV EKEMEQDEEG VETKTNDHAA 
IADTETVIDT SSILIGDGKW DE