Gene PHATRDRAFT_18319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_18319 
Symbol 
ID7197368 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1128122 
End bp1129768 
Gene Length1647 bp 
Protein Length481 aa 
Translation table 
GC content53% 
IMG OID 
Productadenosylhomocysteinase 
Protein accessionXP_002177758 
Protein GI219112013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.476955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATTCGAGTC GATTCGATCG TAAAAAAGAC ACGTTCACCT ACACACCTAT TATATCCAAT 
CACAGCTACA TCATGTCTAC TGGAGATTAC AAAGGTAAGC TTGTCGGCGC TTTGTGTTGG
TCTCGTGAAA ATCTGGGTAT CCTTTAGATT CCTTCGCAAT GCCAATGTCT CTCACCCGCT
ATGTTTGACA ATGCCAGTTG CCGATATTTC TCTTGCCGAC TACGGTCGCA AGGACATTGA
ACTCGCCGAA GTCGAGATGC CTGGTCTCAT GGCGTGCCGT GAAGAATACG GACCCGCCAA
GCCGTTCGGA GGTGCCCGTA TCTCTGGATC GCTGCACATG ACCATCCAGA CTGCCGTCTT
GATCGAGACC CTCAAGGATC TCGGCGGAGA TATCCGCTGG TGCTCGTGCA ACATCTTCTC
CACGCAGGAC CACGCCGCTG CTGCCATTGC CCGTGACGAA TCGGCTGCCG TCTTTGCCTG
GAAGGGAGAA TCTCTCGAAG AATACTGGGA GTGCACGCTC AACGCCATTA CGTGGCCCGA
AGACGATGGC AAGGGTTGCG GACCCGATCT CATCGTCGAC GACGGCGGTG ACATGACTCT
TCTTATCCAC GAAGGAAAGA AGGCGGAGGA CCAGTTCCTC AAGGACGGTA CTGTCCCCGA
CCCGTCCTCC ACTGACAATG CCGAGTTCAA GATTGTCCTC ACCATCATCA AGCGTCTTCT
CGAGGGCGGC GAAACCGACA AGTGGAACAA GATTGCCAGT CGATGCAAGG GTGTTTCGGA
AGAAACCACC ACTGGTGTTC ACCGTCTCTA CACCATGGAG AAGACCGGAA CACTACTCTT
CACCGCCATT AACGTCAACG ACTCCGTCAC CAAGTCCAAG TTCGACAACT TGTACGGATG
CAAGCACTCG CTCCCGGATG GTCTCATGCG TGCCACCGAC GTCATGCTGG CCGGGAAGAA
GGCCGTCATT GCCGGATACG GTGATGTCGG TAAGGGATGC GCCGCCGCTA TGCGCGCCTG
CGGATGTGTC GTTTACGTCA CCGAAATCGA TCCGATCTGT GCGCTTCAGG CATGCATGGA
AGGATACCAG GTAGTCACGT TGGAAGACGT CGTTGACACT GCTGATATCT TCATTACTAC
CACTGGTAAC AAGGGAATTC TTATGTGCGA GACCATGAGC AAGATGAAGA ACAATGCCAT
TGTCGGAAAC ATCGGTCACT TTGACAACGA GATCGACATG GACGGTCTCA TGAAGGCTGC
CAAGCGCATC AACATCAAGC CCCAAGTAGA CAAATTTGTC TTTGAGTCCG GCAACGGTAT
CATTGTTCTT GCCGAAGGAC GTTTGCTCAA CTTGGGTTGC GCCACCGGAC ACCCTTCTTT
CGTCATGTCC TGCTCCTTCA CAAACCAAGT TCTTGCCCAG CTCGAACTCT GGAACGAAAA
GGACTCTGGC AAATACGCGC ACGGTAAGGT GTACGTCCTT CCCAAGACCC TCGACGAGAA
GGTCGCCCTT CTTCATTTGG GATCCCTGGG TGCCAGACTG ACCGTCTTGT CGGATGAGCA
ATCCGAGTAC ATTGGCATTC CGGTCAACGG TCCGTTCAAG CCGGATACTT ACCGTTATTA
AACATTTATA GACCTTTTTC AGCGAAT
 
Protein sequence
MSTGDYKVAD ISLADYGRKD IELAEVEMPG LMACREEYGP AKPFGGARIS GSLHMTIQTA 
VLIETLKDLG GDIRWCSCNI FSTQDHAAAA IARDESAAVF AWKGESLEEY WECTLNAITW
PEDDGKGCGP DLIVDDGGDM TLLIHEGKKA EDQFLKDGTV PDPSSTDNAE FKIVLTIIKR
LLEGGETDKW NKIASRCKGV SEETTTGVHR LYTMEKTGTL LFTAINVNDS VTKSKFDNLY
GCKHSLPDGL MRATDVMLAG KKAVIAGYGD VGKGCAAAMR ACGCVVYVTE IDPICALQAC
MEGYQVVTLE DVVDTADIFI TTTGNKGILM CETMSKMKNN AIVGNIGHFD NEIDMDGLMK
AAKRINIKPQ VDKFVFESGN GIIVLAEGRL LNLGCATGHP SFVMSCSFTN QVLAQLELWN
EKDSGKYAHG KVYVLPKTLD EKVALLHLGS LGARLTVLSD EQSEYIGIPV NGPFKPDTYR
Y