| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_18246 |
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| Symbol | EPSPsy |
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| ID | 7197471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 915349 |
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| End bp | 916832 |
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| Gene Length | 1484 bp |
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| Protein Length | 483 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | XP_002178032 |
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| Protein GI | 219112561 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.764746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTGGTGAC GGTTGCTCCG ACACTTTCTA CCATGGTTCA GATTCAGTCG CTTACTCCGG
TGGTGCTTAT CTTGTCGGCC CTCGCAGGAG CACAGGCGTT TACGACAGAC CGATTCGGCT
CAATGAGATC GTCTCCATTG GCGCTAGCTA CGACTACTGG CGCTACCGAG ACCTTAACTG
TCAAGCCGAT CAAGAGTCTT GATGGAACGG TGACCCTCCC TGGTTCCAAA TCTCTGAGCA
ACCGCTGCCT TTTGCTGGCT GCCTTGAGCG AAGGCAAGAC GCGTGTCAAC AATCTTTTGG
ATTCCGACGA CATTTGTTAC ATGCTGCAAG CCTTGGAACA ACTCGCGGTT CCTGTGGAAC
GCCATTCTGA TGATTCTGTA ACGGTAACGG GAAAGGCCGG TCCGATCAAC TCACCTACTC
CGGAAAAGGT ATGTGAGCTT TTTTTGGGAA ACGCAGGAAC TGCTATGCGT CCTCTAGCAG
CTGCCTTGTG TATGGGCAAA GGAAAGTTTT TGCTGGACGG AGTTTCCCGT ATGCGAGAAC
GTCCGATCGC AGATTTGGTT GATGGACTCA AACAGTTGGG AGCAGATGTG TCCTGTGTTG
AAGAATCAGG ATGCCCTCCG GTCACAATCA ATGCAAATGG TTTGCAGGGT GGATGCGCCT
CCATTAGTGG AAAGATGTCT TCGCAATTCC TTTCATCGTT GCTGATGGCT GCTCCATTAG
TCGACGGTGA CATCAACATT TCCATCAAAG ACGAGCTCAT TTCTGCTCCA TACGTTGCTC
TTACCATTGG TTTGATGAAG AAATTCGGTG TCAACGTTGA TATTGAGGGG GATATGGACG
GTGCCCCTTC CTTCAAGATT GCTTCCTCCG AAAAATATAT CAGCCCAAAG TCTATCTTGG
TTGAAGGTGA TGCAAGCTCA GCAAGTTACT TTGTGGCAGG CGCTGCGATA ACGGGTGGAA
CTGTGACCGT CCGCGGATGT GGATCCGAGA GTGTACAAGG TGATGTTGCG TTTGCCAATG
TTATGGAACA GATGGGCGCT ACGATCACCT GGGCTCCGGA AAGCATCACC GTCACACGAG
ACCCGTCTGT GAAGCTCAAG GGCGTCGATG TGGACTGCGG AAAGATTCCA GATGCTGCCA
TGACTTTGGC TGTAGCAGCT CTCTTTGCAG AAGGGCCCAC AACGATTCGG AATGTTTATT
CATGGCGACT GAAGGAAACA GAGCGAATGA AAGCGATTGT GGCCGAATGT ACCAAGCTTG
GGGCAATCGT GGAAGAGTTT GAAGACTATT GTATAATTCA CCCTCCAAAG GACAACATTA
TCAACGATAA CGTACTGATT GAGACGTACG ACGATCACCG AATGGCTATG ACGTTCAGTC
TGGTGGCGTG TGGGGGTGTG AGCGTCATCA TTAATGATCC CGGCTGCACG GGGAAAACAT
TTCCAACATA TTTCGAGATG TTAGAAAGTA TCTCATCTCA CTAA
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| Protein sequence | MVQIQSLTPV VLILSALAGA QAFTTDRFGS MRSSPLALAT TTGATETLTV KPIKSLDGTV
TLPGSKSLSN RCLLLAALSE GKTRVNNLLD SDDICYMLQA LEQLAVPVER HSDDSVTVTG
KAGPINSPTP EKVCELFLGN AGTAMRPLAA ALCMGKGKFL LDGVSRMRER PIADLVDGLK
QLGADVSCVE ESGCPPVTIN ANGLQGGCAS ISGKMSSQFL SSLLMAAPLV DGDINISIKD
ELISAPYVAL TIGLMKKFGV NVDIEGDMDG APSFKIASSE KYISPKSILV EGDASSASYF
VAGAAITGGT VTVRGCGSES VQGDVAFANV MEQMGATITW APESITVTRD PSVKLKGVDV
DCGKIPDAAM TLAVAALFAE GPTTIRNVYS WRLKETERMK AIVAECTKLG AIVEEFEDYC
IIHPPKDNII NDNVLIETYD DHRMAMTFSL VACGGVSVII NDPGCTGKTF PTYFEMLESI
SSH
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