Gene PHATRDRAFT_10102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10102 
Symbol 
ID7197521 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp480675 
End bp481529 
Gene Length855 bp 
Protein Length214 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177943 
Protein GI219112383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.656124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGTCGGTCT GTCCCTTGTG TTGCGAGGAG TTGGATTTGA GTGATCAGAG TTTCTATCCC 
TGTCCCTGTG GATACCAGGT GTGCATGTGG TGCTGGCACC GCATCAAGGA ATCGGAGTCG
GGCTTGTGTC CGGCTTGTCG ATCCCCATAC GGCGAAGATC CCCACCAATT CAGTGCAGTC
GACGTGGAAG CCGCTCTCAA GGCCAACAAA CTAAAAGAAG ACGCCGTCCG CAACCAATCT
CAACACGCCA AACACCAGAA TATCAGCAAT ATCGGCCACC ACAGCCTCAA CAGCCTCAAC
AGCAGCCACA GCCACAGCAA TACTCATCCA CACAACCATC AGAACAACAA TAACAGTCAC
AGCAGCAGCA ACGGCAGTAG TAACGCCAAC AATGCAAACA GCAGCAATAA TCAAAACATG
GTCATGGAAG CCCCCAAGGA TCGGACCTTG TTGGCCAATA TGCGCGTCAT CCGGCGGAAT
CTCATTTACG CCGTCGGGCT ACCCCCTTCC ATCGCTAACG AAGAAACACT CCGCAAACCG
GAATATTTTG GACAGTACGG ACGTATCGCA AAAATGGTAC TCAACCGCAA CAACGTTACG
GCCTCCAATA CCGTCATCAA CGGTGAAATC CGTCGCGCCT CCGCCAGCGC CTACGTAACC
TTTGCGCACA AAGAAGACAC GTTGGCTTGC ATACTGGCGT TGGACGGATT GGTACTCGAT
CACCGCAGCG TGCGAGTAAG TTACGGTACC AGCAAGTACT GCTCCTCCTT TATCAAGAGC
GTCCGCTGCA ACAACCCCGA ATGCACGTAC CTGCACGAAA TGGGTGCGGA AGAAGACACC
TTTACGAAAC AAGAA
 
Protein sequence
QSVCPLCCEE LDLSDQSFYP CPCGYQVCMW CWHRIKESES GLCPACRSPY GEDPHQFSAV 
DVEAALKANK LKEDADRTLL ANMRVIRRNL IYAVGLPPSI ANEETLRKPE YFGQYGRIAK
MVLNRNNVTA SNTVINGEIR RASASAYVTF AHKEDTLACI LALDGLVLDH RSVRVSYGTS
KYCSSFIKSV RCNNPECTYL HEMGAEEDTF TKQE