Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10025 |
Symbol | |
ID | 7197474 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 925451 |
End bp | 926419 |
Gene Length | 969 bp |
Protein Length | 295 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177720 |
Protein GI | 219111937 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGCA AAAACTCGAG CCCCCCTGAG AATTGCCGGT TCGCCATTCC GAAAAAGGGA CGCTTGCACG ATAAAATTCT ACAGATGCTT AAAGGTTCCG GTATAGAATT TCGGCGTGAA CCTCGCCTTG ACGTTGCCCT CTGTGTTGAC TTGCCGATCA CGCTGGTCTT TCTGCCGGCG TCTGACATTG CCAAATATGT TGGAGAGGGC AATATTGATC TAGGCATCAC TGGCTTGGAC ATTGTGAAGG AAAGTCAGGT CGAAGTGGAC CACGTAATGG ACCTGGGATT TGGAAAGTGC AAACTTTGTG TACAAGTACC TAGCGACGAC AATATCACAG ACGTCAGTAC ATTGGCGGGT AAGCGCATTG TTACTTCGTT TCCGGAACTT ACTAAACAGT TTTTCCAGCC ATTTGACGAT GAACTCGGTG TTGAGACAAA GGTCAAGTTT GTTTCGGGTT CTGTCGAAGC AGCCTGTGGG CTCGGTTTAG CTGATGGTAT TGTGGATCTT GTGGAGACAG GAACAACGAT GCGGGTAAGG AAGGACTGTT TGAATCATAT TTGGAGTCCT TTAGTGTTGC GGCAGGATTG CTAAAACCAT GTGTGATTTC TTTAGGCTGC CGGCCTTGAA GTTGTTGCCG ATATTATCTC GACCCAGGCC ATGCTGATTG CTAACACGCA TACCAAGCAC ATTGATATCA TCCACCTGAT AAAGCGTCGC TTAGAGGGGT ACATTACGGC CACAAAGTAC GTTATGCTAG TGTACAATGT TTCGAACGAA TTGGTGGAGA GAGCGGTGGC GATCACCCCT GGAAAGCGGT CACCGACTAT CACGGCTCTA GATGACGGTA ACTCCAAGGC GGTTTCCAGT CTTGTACTCG CCAAGGAGGT TAACCAAAAA ATGGATGCTT TGCATGATAT CGGAGCTACA GATATCCTTG TGCTTGACAT TTCCAACTCC CGTATGTAA
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Protein sequence | MDRKNSSPPE NCRFAIPKKG RLHDKILQML KGSGIEFRRE PRLDVALCVD LPITLVFLPA SDIAKYVGEG NIDLGITGLD IVKESQVEVD HVMDLGFGKC KLCVQVPSDD NITDVSTLAG KRIVTSFPEL TKQFFQPFDD ELGVETKVKF VSGSVEAACG LGLADGIVDL VETGTTMRAA GLEVVADIIS TQAMLIANTH TKHIDIIHLI KRRLEGYITA TKYVMLVYNV SNELVERAVA ITPGKRSPTI TALDDGNSKA VSSLVLAKEV NQKMDALHDI GATDILVLDI SNSRM
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