| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_974 |
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| Symbol | |
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| ID | 7196285 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 542625 |
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| End bp | 545069 |
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| Gene Length | 2445 bp |
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| Protein Length | 603 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176605 |
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| Protein GI | 219109702 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000875731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCAGGGCTTG GAAACCTCGG CAATACGTGC TTTATGAATT CCACATTGCA ATGTCTGGCT
CATACGCATC CCCTGAAGCG CTATTTCTTG TCAGGAGAAT ATGGAGATGA CTTGAATCGT
AACAATCCGT TGGGAACGGG TGGGGACTTG GCGACTCAGT TTGCGCAATT GATGATGGAC
ATCTGGATTA CAACGGCTCC TCCGCGCAAC TTTCTTTCGG AGGCCTCTAC CGGTTATGAT
TCTTCCTCAT CACTAGCTAA CAACGTGGTA TATCCGCGAA ACTTCAAATA TACGCTTGGT
AAGCATGCGG AGCGGTTCGT AGGGTATGAC CAACACGATT CGCAAGAGCT CGCAACCTAC
CTGCTAGATG CTCTGCATGA AGACACAAAT CTTGTAACAA AGAAGCCATA TGTGGAAAAG
CCGGAGCAGA AGGACACTGA AAGTGACCAG GAGGCCGCAG ATAATGCATG GGAACTGCAT
TTGAAACGAG AAAATAGCAA GGTTCTTGAA AATTTTATGG GACAGATCAA GAGCCGAGTA
CAATGCTGCA AGGCAAACTG CAATCGGGTA TCGACCACCT TTGACCCATT TATGTATTTA
TCCGTACCGA TTCCGGGATC AATGGAACGC ATACTCAAGG TTACATATGT CCCTATGAAC
CCTCAGCAGC GTATGCAGAA GCTTGAGATC ACAATCAGCA AAATGGCGAC GATGAAAGAG
CTCGTCGAAA GAGTATCAGA GCAATTGCAG AAGTTTGGTC TTCTAAAGAC CATAGACGAC
CTCGCATTGG AGGACACGTG TGCTGTGGAC ATCTGGCATC AAGAGGTTTA CAGCTGGTAC
GAGCCTAAAA ATGAAGTGGA TCGTATCAGA GATAACGATT ATACGTTCTT GTACGAATTG
GCGCCTCTGG CAATGGTCAA GGCGATGGGA CAGACTGTGC TAAATGGAAT TGAAACTGAC
GACGATGTTG GTCTTGGAAC AATTACGAAG CATTACCAGC TCGATTTGGC CACAATGACT
AAGTTGAATA GCGGCGATGA TTGGTCAGCA AAGCTGTCGA CATACCTTCA GAACCCCACC
ATGTTGCATA ATTCGTTTGA CCCAAAAAGT GGATTATGTA GCGAACGTCG TCTGATTTTT
CTGCGTTTAA TGAATTTCAT TGATTGTTGC TATCGAGAAG TTGACGATGA CATATCAGGT
CAAAAGAGGT CGCGCGACAA CTGCTCTGAA TTGGTGAATA CTTCGACGAA CGAAGAGGAT
GTGCTTGATA TCATTGAGCG ATGCGAATCC TCTGCTTTCC TTGAGAACGT CAGATCAAGG
CATGATTTAG CAATTTTGGA GTTTATAGCG TCAAAAATGA GAAAAGAAAT TGTCAGTCTT
GAGAATCAAC AAACAACTAT GTACCCTGAT GGAGTGATAA TTCAAATCCA TATTCGGAAA
GCTACCTTGT TATCTGGTAA CCATCGCACG TCTGATACTG TCCCGCTAAT TATGCGGGTT
TCTGGTAGCA TGACTGTATA TGAGCTTAGA GAAGAGCTTG CAAGACGCCT TAAGAGATGC
TTAAATACAG GACGTGGGAA TGTGTCAGGG GAATCAACGT CTGAGCAGGA CGAGGCCGAG
ATGAGCAAAC ACGCTGGCAA CGGTAGCTTT GCATCGCCAG AGCTTTTGAT AATAAGGCAG
ATTCCGCTTT CATACCAACG AAAGAGTCTG AGTAATTACC GATCGACGGC AACTTTAGCA
GCCAGTAGAC AACTGGGGTC ACTGGAACTT GTCAGCAACA AAAATAGGCT GTTAAGGCCA
CGGTCTCTGG CATCGAAGTC GAATGAAGAT GAGCGCTCAA TTTTAGCAAA TCTAGTTGGG
CACCATGGGA CGGTTTTTAT GGAATGGCCA GAGACTCTTT ACAACAATGC TTTTGATCCA
AAAGAATATG AGCATTTTGA TTGCCCAAGT GATCTGTACA GCGATGAATG TGTAGCAAGG
AAGTCTTCGA ATGCAACGAC AGTATTGGAT TGTATCGAAA AATATTGCCA GATGGAGCAG
CTGGAGGATA CTGAGATGTG GTACTGCAAC AAATGCAAAG ATCATGTCCG AGCGTGGAAA
CAGACTCACC TCTACCGCTG TCCTCCAATA TTGATAGTGC ACTTAAAACG CTTTCAGTAC
TCGTCATCAA CGCACCGCCG AGACAAAATT GGGCTATTTA TTGATTTCCC TCTCGAAGGA
CTTGATCTTA CGAGCGTTGC ACTTCATTGG ACCGGAGCAG AGAAACCTCT TTACGATTGC
TACGCCGTAA GCAATCACTA CGGGGGGCTT GGTGGTGGAC ACTATACTGC TTATGCATTA
AATGACGACA AAGTTTGGTG TCATTACGAT GATAGCCGAG TGACCGCCAA TGTGGAACCC
GAAGAAGTTG TGTCAGAAGC AGCCTACGTA CTGTACTATC GGAGA
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| Protein sequence | SGLGNLGNTC FMNSTLQCLA HTHPLKRYFL SGEYGDDLNR NNPLGTGGDL ATQFAQLMMD
IWITTAPPRN FLSEASTGYD SSSSLANNVV YPRNFKYTLG KHAERFVGYD QHDSQELATY
LLDALHEDTN LVTKKPYVEK PEQKDTESDQ EAADNAWELH LKRENSKVLE NFMGQIKSRV
QCCKANCNRV STTFDPFMYL SVPIPGSMER ILKVTYVPMN PQQRMQKLEI TISKMATMKE
LFGLLKTIDD LALEDTCAVD IWHQEVYSWY EPKNEVDRIR DNDYTFLYEL APLAMVKAMG
QTVLNGIETD DDVGLGTITK HYQLDLATMT KLNSGDDWSA KLSTYLQNPT MLHNSSRDNC
SELVNTSTNE EDVLDIIERC ESSAFLENVR SRHDLAILEF IASKMRKEIV SLENQQTTMY
PDGVIIQIHI RKATLLSGNH RTDECVARKS SNATTVLDCI EKYCQMEQLE DTEMWYCNKC
KDHVRAWKQT HLYRCPPILI VHLKRFQYSS STHRRDKIGL FIDFPLEGLD LTSVALHWTG
AEKPLYDCYA VSNHYGGLGG GHYTAYALND DKVWCHYDDS RVTANVEPEE VVSEAAYVLY
YRR
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