| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_9327 |
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| Symbol | secA |
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| ID | 7195980 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 602747 |
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| End bp | 605650 |
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| Gene Length | 2904 bp |
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| Protein Length | 935 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | nuclear-encoded-like protein of plastid sec |
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| Protein accession | XP_002177119 |
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| Protein GI | 219110735 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGACT TCCTGACCGG TGCGGATTCT TCCAAACGAG ACGCCGACAA CAAGTCCTAC
TTGGATCAAT TGCAAAAGCG TGTGAACGTT GTCAATAGCT GGGAAGCGAC GGTAGAAGAT
CTCGGGGACG ATGAGCTGGA AGCCAAAACA GCCGACTTCA AAAGTAGACT TGCTAAGGGG
GAAGACATCA ACGGACCCCT ACTCGAAGAG GCATTTGCGG TTGTTCGCGA AGCTGCTTGG
TACGTGTACA TCATTATGCT GGAACGGTAT CAATCATGTC CACCTTTCAA TGCATCTCAA
ACATAATTTC CACCCTTGTC TTTCTCCTTA TACAGGCGTG TTTTGGAACT ACGACACTAC
GATGTGCAAA TCATGGGCGG ATTCATTCTT CACGATGGTC GCCTGGCCGA GATGGCCACT
GGTGAAGGAA AGACGTTGGT CTCCACCTTA CCCACCTACG TCAACGCATT GACAGGAAAA
GCCTCTTTCG TTATCACTGT CAACGATTAC TTGGCCCGCC GTGATATGGA GAAGATGGGA
CAGGTTCACC GCTTCTTGGG ACTCACTGTC GGTTTAATCC AATCCGGAAT GACGGAAGAA
CAACGTCAAA AGGCGTACGC CTGTGATGTG GTGTATGTGA CCAACTCGGA ATTGGGGTTT
GATTATTTGC GTGATCACTT GGCGCTATCA CCGAAACAGA CCGTATTGCC CGGCGGAGCT
GGGGAGTTTG ACGGATTTTG CGTGGTCGAT GAAGCCGATT CGGTTTTGAT TGACGAGGCT
CGAACGCCCC TCATTATCAG CAAACAAGTT CCGGCACCGG CCAACAAGTA CGCGACGGCC
AACCAACTCG CGGGTGCATT GAAAACAGGA ATTCACTACG AAGTGGATCT GAAAAACAAA
AATGTGGTGA TGACGGAGCA AGGATATCGT GAATCGGAAC GTGCGCTGGG CGTAGATAGT
CTTTTTTCAA TTGATGGGAA AGGGGAAGCG TGGGCGCCGT TCGTAGCGAA TGCCGTCAAG
GCCAAGGAGC TCTTTGAAAA GGACGTCGAG TACACTATTT TGAAGGATAG TTCGGGTAAG
TCTACTGGAG TCGGTATCAT CGATGCGTTC ACTGGCCGTG TTCTGGACGG TCGCCGGTGG
TCCGATGGGC TCCACCAGAG TATTGAAGCC ATGGAAGGCA TTGATGTTAG CGAACAGAGT
AAGGTGATCG CAAAGGTAAC CTACCAGGCC CTTTTTCGTC AATTCACCCG ATTGTCGGGC
ATGACGGGTA CGGCCATGGC TGACGCCTCA GAGCTGGAAC AAACGTATGG TCTCATGGTC
ACTCCCGTGC CGACGGCCTT GCCCGTTGCT CGCCGCGACT ACGCGGACGT TGTCTTCAAG
ACTCGCAGAG CTGCTGATCG TAATCTGATC AAAGAAGTTG TGAACGTTGG TGGGGGTGAG
CCTTTAGGTC GCCCATGTTT GATTGGAACC ACATCAGTTG CACAGAGTGA AATTTTGGTG
GAGGCGCTTG TCAAGGAAGG AATCAAGGCG GAACTTTTGA ATGCGTCCCC AAAAAATGCG
CCACGAGAGA GCGAAATTGT TGCGCAAGCT GGTCGATCTG GTGTGGTGAC GGTTGCCACA
AACATGGCAG GACGCGGTAC AGATATCTTG TTGGGAGGCT GTCCGACGAC AATGGCACGA
ATAAAGACAA GATCTATCCT ATTGGATCGA GGAGTTTTGT CGGCGGAAGA AAAAGCGGGG
GTTCCGCCTT CTCCTTCCGA AAACTACTTT CCGGCTCCTA TCGATGAAGA CGTTCTTACC
ATGCTGAATG ACGCTGCCGC TTCTTTAAAG AAGGCAATGG GCATCGAATT GACCGGTATT
GAGCTCGATG AAATCTTAAC TGTTGCTTTT GACACAACCG AGGCAGAAGA TGACCTGGAC
TACATTGTGA AACTTCGCGA CGCTGCAGCT GCCGTCAAGG CCGTTTACGA GCCTGTATTG
GCTGAAGAGA AGGAAGCCGT AAAAAAAGCA GGTGGTCTCT ACGTAATGGG AACGAACCGT
CACGAATCAT CCCGTATCGA TCAACAACTA CGAGGGCGTT CCGGTCGCCA GGGTGATCCA
GGTTCGTCGC GTTTCTTCCT TTCCTTTGAA GACGACATGT TTGTCATCTT TGGAGGTGAC
CAGTTGAATA GAATGCTGGA GATGTTTCGA GTTAGTGAGG ACATGCCAGT CGAAGCTCAG
CAGGTGACGG ATGCTTTGGA CAAAGTTCAG AAGCAAGTCG AAGAAAAATA TAGAGATATT
CGCCGAGAAA TCTTTAACTT CGACGACGTA CTCAATAGCC AGCGAAAGGT GATCTATTCA
CGCCGAAGAG GAGTACTATT TTCGGCTCCG GAAGATTCGT TGAAAATGAT GAAGACGTAT
AATGAAAAGA CAATCCAAGA CATTGTCAAG GCGCAGACAG ACGAGGCTGG TAGCGTCAAG
GTCGACAAAG TTTTGGAAAA GATTGCTCAG TTCTTTCCAC TTGCACAGCC TTTGGTCACC
GTTGGCGACT TAAGTGGTAA GAATCAAAAT GCTGTCGCTG ACCTTCTGAA TGTTGCCGTT
GAGGAGGTTT TCTCCGCAAA GATAAAAGAA ATGGATGCCC TAGCAAAGTC CGCTGGAAAT
GCCCCGAATT CGCTAGGGCG GTCGGCCAAC TACATCGCGC TCGTAACCAT GGACAACGCC
TGGAGTGATC ATTTGCAGGC AATGGAGAAT TTGAAAGAGT CTGTAATTCT ACGGCAGTAC
CAAGGAAGGG ATCCTGTGGC CGAGTACCAA AACGAAGCGT TCAAGCTGTT TCAGGGTCTG
GAGGACACAA TGCGCTTCAA CGCCGTTTAC TCTCTATGGC AATCACTCGC AACGCAACCT
CAAGCAGTAC AACAGCAGAC TTGA
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| Protein sequence | MEDFLTGADS SKRDADNKSY LDQLQKRVNV VNSWEATVED LGDDELEAKT ADFKSRLAKG
EDINGPLLEE AFAVVREAAW RVLELRHYDV QIMGGFILHD GRLAEMATGE GKTLVSTLPT
YVNALTGKAS FVITVNDYLA RRDMEKMGQV HRFLGLTVGL IQSGMTEEQR QKAYACDVVY
VTNSELGFDY LRDHLALSPK QTVLPGGAGE FDGFCVVDEA DSVLIDEART PLIISKQVPA
PANKYATANQ LAGALKTGIH YEVDLKNKNV VMTEQGYRES ERALGVDSLF SIDGKGEAWA
PFVANAVKAK ELFEKDVEYT ILKDSSGKST GVGIIDAFTG RVLDGRRWSD GLHQSIEAME
GIDVSEQSKV IAKVTYQALF RQFTRLSGMT GTAMADASEL EQTYGLMVTP VPTALPVARR
DYADVVFKTR RAADRNLIKE VVNVGGGEPL GRPCLIGTTS VAQSEILVEA LVKEGIKAEL
LNASPKNAPR ESEIVAQAGR SGVVTVATNM AGRGTDILLG GCPTTMARIK TRSILLDRGV
LSAEEKAGVP PSPSENYFPA PIDEDVLTML NDAAASLKKA MGIELTGIEL DEILTVAFDT
TEAEDDLDYI VKLRDAAAAV KAVYEPVLAE EKEAVKKAGG LYVMGTNRHE SSRIDQQLRG
RSGRQGDPGS SRFFLSFEDD MFVIFGGDQL NRMLEMFRVS EDMPVEAQQV TDALDKVQKQ
VEEKYRDIRR EIFNFDDVLN SQRKVIYSRR RGVLFSAPED SLKMMKTYNE KTIQDIVKAQ
TDEAGSVKVD KVLEKIAQFF PLAQPLVTVG DLSGKNQNAV ADLLNVAVEE VFSAKIKEMD
ALAKSAGNAP NSLGRSANYI ALVTMDNAWS DHLQAMENLK ESVILRQYQG RDPVAEYQNE
AFKLFQGLED TMRFNAVYSL WQSLATQPQA VQQQT
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