Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9266 |
Symbol | |
ID | 7196375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 957311 |
End bp | 957985 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176695 |
Protein GI | 219109884 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.774425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGAAAG TTGTCATTCT AGTCACTGCA GCTCCCGATC TCAACGGCCA CAAGACCGGT CTGTGGCTGG AAGAATGCGC CGCACCTTAT TACATCTTCA AAGACAAGGG CTACGAAGTT GTCCTTGCGT CCCCAAGTGC GGGGCCCGTA CCGATTGACC AAGTTTCCGT CTCTGACGAT TTTTTCACAG ACGATTCGAA GAAGTTCCTG CACGATGCGG AGGCAGTAGG GGCGCTGAGT CACTCGGTTG AATTGGGCAG TATTGACATG TCTACCGTCG ACTGTATCTA TCTCGCTGGG GGGCACGGAG CTTGTGTTGA TTTTATCAAC AATCCCAGCG TCACCAAAGC AGTTCAAGCG ATATATGCAG CGAATAAAAC GGTTGCTTCG GTGTGTCACG GGGTGATTGC GCTTGCTGAT TGCCACCAGC TCGACGGAAC GCCTCTCGTC AAGGGGCGAA AAGTGACGGG ATTCTCTAAT TCCGAAGAAG AAGCAGTCGA ACTGACGGAG GTGGTTCCGT ACTTGTTGGA AAGTAAGCTG AAAGAACAAG GATGCGAATA CGAAAAAGGC GAGAATTGGT CTTCTAAGGT GTGTGTAGAT GGCAACTTGA TCACTGGGCA GAATCCGCAG AGCTCTGCTG AGGTGGCCAG GACCATTGTT GAGATTCTTG GATAA
|
Protein sequence | MPKVVILVTA APDLNGHKTG LWLEECAAPY YIFKDKGYEV VLASPSAGPV PIDQVSVSDD FFTDDSKKFL HDAEAVGALS HSVELGSIDM STVDCIYLAG GHGACVDFIN NPSVTKAVQA IYAANKTVAS VCHGVIALAD CHQLDGTPLV KGRKVTGFSN SEEEAVELTE VVPYLLESKL KEQGCEYEKG ENWSSKVCVD GNLITGQNPQ SSAEVARTIV EILG
|
| |