| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_8828 |
|---|
| Symbol | |
|---|
| ID | 7196962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 2427057 |
|---|
| End bp | 2428034 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176977 |
|---|
| Protein GI | 219110451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACG AACGTATCCT TTCCATCCAG TCGCATGTAG TTTCCGGATG TGAGTACCGC
CAACACGCCG GAGATTCGAA CTTGTGAGAA AGTCAGTGCT GGTGTAAGGG CTCACTCATT
CGCGTGTTTG TTGTTCGTCG GAACATTCCA GATGTTGGGA ACAAGGCAGC CGTGTTCCCT
TTACAGCTTC TTGGTTTCGA TGTTGACGTT GTAAATTCTG TGCATTTTTC CAATCACACG
GGGTATACCA ACGGATGGGA AGGGGACGTC TTGAAAGGAG AACAACTCCG AGCTATTCTG
GACGGTCTCG ATCGGAACGG CTTGCTATCG TCGGTAGGTC ACGTCTTGAC GGGGTACATT
GGCTCGATTT CTTTCCTGGA AGCCGTGCTG GATGTCATCA AAACTATTCG AATGAAGCAT
AAGGTTCGGT TCGTGTGTGA TCCGGTACTG GGAGACAAAG GCGAGTTCTA CGTTCCCAAA
GAGCTGGTGC AGGTGTACCG AGAAAAAGTC ATTCCGATAG CGGACGTTCT GACGCCCAAT
CAGTTTGAAG TCGAGCAACT AACAGGAATC GATGTCAAAA CATTGAATGA TGCCAAAATG
GCGTGCCAGG CTTTGCACGA CATGGGTCCG AGTTTGATAT TCATTACGAG TTGCGAGTTT
TCCGAACGTG AAATGTCGAT ACTGGCGTCT CAGCGTCGCG AAAACGAGAT TCAGCTCTGG
CACATTGCGT GTCCCATATT GGCGGGACAC TTTACCGGCA CGGGAGATTT GTGTGCCTCT
CTCCTGCTTG CGCACACGGC GCGAGATCCG GACAATTTGC CGGCGGCTAT GGAAAAGGTT
ATCAATACCA TGTTTGCGGT GATTGAACGG ACCAGTAAGA ACGGAGGGGA TTCGGTGCAG
TCACGGGAGT TGAGATTGGT ACAAAGCAAA TTGGACATTG AAAATCCGCC GCAGCGTTTC
AAGGCGGAAC GAATATAG
|
|---|
| Protein sequence | MTNERILSIQ SHVVSGYVGN KAAVFPLQLL GFDVDVVNSV HFSNHTGYTN GWEGDVLKGE
QLRAILDGLD RNGLLSSVGH VLTGYIGSIS FLEAVLDVIK TIRMKHKVRF VCDPVLGDKG
EFYVPKELVQ VYREKVIPIA DVLTPNQFEV EQLTGIDVKT LNDAKMACQA LHDMGPSLIF
ITSCEFSERE MSILASQRRE NEIQLWHIAC PILAGHFTGT GDLCASLLLA HTARDPDNLP
AAMEKVINTM FAVIERTSKN GGDSVQSREL RLVQSKLDIE NPPQRFKAER I
|
|---|
| |