Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_51406 |
Symbol | |
ID | 7196509 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1339530 |
End bp | 1340506 |
Gene Length | 977 bp |
Protein Length | 297 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176767 |
Protein GI | 219110030 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.608395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GATCCGGTGC TGGCCGAATG GGAACGGGAA CACGAGGAAA CAACCAAAAT CAAAAACATT GAGTCGCTCG TGTTGGGACC GTACGTTATG GACGCCTGGT ACTACAGTCC CTTTCCTAAG AATTACAGCA ACCTGAAAAC CCTGTACGTC TGTGAGTACT GTCTCACCTA CATGCGCAAG GTCTCGTCCT ATAAACACCA CCGAGCGCAC TGTACCACCC GCCAACCACC AGGAAAGCGC ATTTATCACC AACCGCTACC CAACGATGAA GATGCTTCCT ACTTGGATGT TTACGAGCTG GACGGACAGG ATGCCAAGTT GTACTGTCAA AAGCTGTGTC TACTCGCCAA ACTCTTTCTG GATCACAAGA CCTTGTACTA CGATGTAACC CCCTTTTATT TTTATGTGGT AGCCAAGGTT GACGACCATG GTTCGCACAT TGTCGGCTAT TTCTCCAAAG AAAAGGTAAG GGGATATTCT TGGTAAGCTT GCTTCATGTG CGACCACACC AAAACTCACC CCGCACTTTT TGCTTGCTTT CGAAAAAAGG TGTCGGGGGA AGGCTATAAT CTCGCGTGTA TCTTGACCTT CCCTCCATAC CAAAAAGCGG GATTTGGCAA ATTCATCATT TCTCTCAGTT ACGAATTATC CAAACGGGAG AATAAAACTG GATCCCCCGA AAAGCCCCTA TCTGATCTCG GTAAGGTCTC GTACCGTTCG TATTGGACAC ACGTCCTGTT GAGTGTTTTG TACGAACACG ACCCGCAACA GGATTTGTCC ATTGCTGATT TATCTTTAAC GACCGGTATC AAACAAGAAG ATATTCTGTC GACTCTTCAA CAACTCGAGA TGATTAAAGT TTGGAAAGGG CAGCATGTCG TATATGTCAA ACAAGCGGTG TTGGAGGAGT ACCGAGCACT CAATAAGCGC TTTCGATTGT GTCAGCCAGA ATGTTTGGAG TGGAAGCCTC CGGATGA
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Protein sequence | DPVLAEWERE HEETTKIKNI ESLVLGPYVM DAWYYSPFPK NYSNLKTLYV CEYCLTYMRK VSSYKHHRAH CTTRQPPGKR IYHQPLPNDE DASYLDVYEL DGQDAKLYCQ KLCLLAKLFL DHKTLYYDVT PFYFYVVAKV DDHGSHIVGY FSKEKVSGEG YNLACILTFP PYQKAGFGKF IISLSYELSK RENKTGSPEK PLSDLGKVSY RSYWTHVLLS VLYEHDPQQD LSIADLSLTT GIKQEDILST LQQLEMIKVW KGQHVVYVKQ AVLEEYRALN KRFRLCQPEC LEWKPPD
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