Gene PHATRDRAFT_51406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_51406 
Symbol 
ID7196509 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1339530 
End bp1340506 
Gene Length977 bp 
Protein Length297 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176767 
Protein GI219110030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.608395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GATCCGGTGC TGGCCGAATG GGAACGGGAA CACGAGGAAA CAACCAAAAT CAAAAACATT 
GAGTCGCTCG TGTTGGGACC GTACGTTATG GACGCCTGGT ACTACAGTCC CTTTCCTAAG
AATTACAGCA ACCTGAAAAC CCTGTACGTC TGTGAGTACT GTCTCACCTA CATGCGCAAG
GTCTCGTCCT ATAAACACCA CCGAGCGCAC TGTACCACCC GCCAACCACC AGGAAAGCGC
ATTTATCACC AACCGCTACC CAACGATGAA GATGCTTCCT ACTTGGATGT TTACGAGCTG
GACGGACAGG ATGCCAAGTT GTACTGTCAA AAGCTGTGTC TACTCGCCAA ACTCTTTCTG
GATCACAAGA CCTTGTACTA CGATGTAACC CCCTTTTATT TTTATGTGGT AGCCAAGGTT
GACGACCATG GTTCGCACAT TGTCGGCTAT TTCTCCAAAG AAAAGGTAAG GGGATATTCT
TGGTAAGCTT GCTTCATGTG CGACCACACC AAAACTCACC CCGCACTTTT TGCTTGCTTT
CGAAAAAAGG TGTCGGGGGA AGGCTATAAT CTCGCGTGTA TCTTGACCTT CCCTCCATAC
CAAAAAGCGG GATTTGGCAA ATTCATCATT TCTCTCAGTT ACGAATTATC CAAACGGGAG
AATAAAACTG GATCCCCCGA AAAGCCCCTA TCTGATCTCG GTAAGGTCTC GTACCGTTCG
TATTGGACAC ACGTCCTGTT GAGTGTTTTG TACGAACACG ACCCGCAACA GGATTTGTCC
ATTGCTGATT TATCTTTAAC GACCGGTATC AAACAAGAAG ATATTCTGTC GACTCTTCAA
CAACTCGAGA TGATTAAAGT TTGGAAAGGG CAGCATGTCG TATATGTCAA ACAAGCGGTG
TTGGAGGAGT ACCGAGCACT CAATAAGCGC TTTCGATTGT GTCAGCCAGA ATGTTTGGAG
TGGAAGCCTC CGGATGA
 
Protein sequence
DPVLAEWERE HEETTKIKNI ESLVLGPYVM DAWYYSPFPK NYSNLKTLYV CEYCLTYMRK 
VSSYKHHRAH CTTRQPPGKR IYHQPLPNDE DASYLDVYEL DGQDAKLYCQ KLCLLAKLFL
DHKTLYYDVT PFYFYVVAKV DDHGSHIVGY FSKEKVSGEG YNLACILTFP PYQKAGFGKF
IISLSYELSK RENKTGSPEK PLSDLGKVSY RSYWTHVLLS VLYEHDPQQD LSIADLSLTT
GIKQEDILST LQQLEMIKVW KGQHVVYVKQ AVLEEYRALN KRFRLCQPEC LEWKPPD