| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43095 |
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| Symbol | |
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| ID | 7196721 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 2016921 |
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| End bp | 2024032 |
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| Gene Length | 7112 bp |
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| Protein Length | 2327 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176891 |
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| Protein GI | 219110279 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.30291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGACG ACGACAACGA CAAGGACACT GGAAGTAGCA GCAGTGAACA TAGCGTAAGC
GAATCATCAC GAGCTGAGGG CCTAATCGAC CCCGAATTTC ACTCCGATGA GTCGTATTCG
GAGAGCGTTT CCTCGTCTGA AGAACAGTCC TTGGACCCCA AAAGCCGGCC TTCCAGTCCT
GAACATCTGG TAGATAAGGA TGCTTCTAGT GAAGGAGAAT ATAGCGGTGA ATCAACGTCC
TACAATTCGG AACAGTCGCG ATCCCAAAAT TCATTTGAGT CTGGATCCTA TGATTCTGCA
TCGCGTTCAT ACGAGTCCCG TACTTCAAAG TCCTTCTCGG ATGAGAATTC CTACTTTTCT
GGCTCTGAAG CTGGCTCCCT AGGGTCCCGC TCATACGATT CACAGGCTTC TGTGTCGCAT
TCTGGAGCGG AAGAATCCTA TGAATCAGAT GGGCGTGATG ATCATTATTG TAGTGACCAG
GACAATACGT CGAGATCTCC GTGTTTTAAA AACAATCTGG TCCAGGAAAT CCAGGATGGA
TCCTACACGG GAAGCTACTC AGGCGACGAT CAATCATATG ATTTCAGGAA GCGGGAAGAG
GACGAGATGA TCTCTACATA TGCCGAGGAC TTTCACGACT CACGAGTGCG CAGTGTATCA
GATTGCGATG AGAGCTCTGT CAGCCATTCC AGCTCGTGCA CTGGTTCTTC ACCCGCGGAA
GAATCTTACA CGAGCAATCG TTCTGAGGAT GACCCAGTAC GGAAGGTATA TGGACTGAAG
ACAGCGCGAG CTGACGAGGA TCGATTTCAA TCGTCGAAGG ATTCATCCTT TCAGTCTTCA
TTTGCTAACT CTGCGTTAAG CAGCACCCCT TCATTTGCTG TCGATTCGGA TAGCGAAACA
TATGCAGCAA AGGATCCATT TCAAACCAGA TTTCATCCCA AAGAATTACG TGCGTCAGTA
GGTGGCGACA ATGCCAACAA AAGTAGCGGT CCAGGGTTTT TAGCAAAAGG CGACGTCAAT
GACTTTCAGC CAGCAAAGCG GGTATCCGCA GTCGAGAGTA AGCTGCCGTA TCAGGAGGAT
GTTCCTACCA ACGCTTCCGG AGATTGTAGT TCCAGTGGAG ACACTGACTC ATTTGCAGAC
GACATCAAAG TCGCTGATTC TTCGGGGAGC AATGAAAGTT CCATAGGAAT CGAGGATCTT
CAGGAAAATT CGGAGACGGA CGAATATGAA TCAGGATCTA TTTATGAAGA ATCTCAGCCG
CAACAATCCA ATCGGCACGG CCCTTACACC CAACGCGTTG AAATCAATCG TGCCAACACG
ACATGTGAAA AACAGCGAAG TTGCTCAGAG TGCAGTAGTG ATGGTCAATC ATTTGCTTCC
GAAAGAGTAA CTGAGGAAGA CAATGAAGAC CACGCTATTT ATTTTGGTAC CGCGTTACCA
CAAGGCATCG ACCAAAGCCT TCCCGGACAT GAACAGAAAA AGCTCGATAA TGACTTTTCA
CGAAATTCCG AAATAAGCAA AACACTAAGC GTCAGCGAAG CCTCAACAAT AGACGACTCT
CATGGCAAGG CTTCTCTTCG TTCTGCTCAC ACCTTGGAAG TCGGTTTCGA AAACAGCTTT
GGTGATAGTT TTGCATCCAC GTTCGACAAC ACAGACCCCT TCGGAGATGT CTTCGGCTCG
GGTTCATTTC ATCCTGATGA AAGCTTTGGC GGTTCGTTGC TCTCGAAGGA CGAACCTCTC
GGAAAAATTA CAGAGCATAG TGTTGAGCAA AGCTCGCCGG ATTATTCTGG CACAAGCGAA
GTGATAGGCT CTCCTTACAG TCAGAAGTTC GATTCGAGGG TGCATCATGA TGGAGAGAGG
TCGCTACTGG GGGGTGGAAG TAGCGTTGAA GATTCTACTG GTATTGAGAA CAGTGTTAAG
AGGGAAGGCT CGCGAAGAAA TCTCGGTAAG CGGACATCAG CCAACGCGCT AAACATTGTA
TCACCCAGCT CTCCTCTTGA AGACATTCCA CAGATTTTTC CTGTTACTGT ATCTGGTGCG
GAAGAAGAAA ATGAAACCAT CGCTCTTGCA TCTAAGCAAT ATAACAGATA TTCGCGTGAG
CAAATGTCAA AACTTGCGAA TGCACCACAG TACCCTTACG AAGGAGACGA ATTCAATCGC
AGTCCTAGAA GCCCAAACGA AAAGAGCAAG AAGAAGAGGA GACGACGCGA GAAATTCAAG
AGTACCGAGC TTCTTGATCT AGTTGCAAAT GTCAATGATG CAATCGTAAG GCTCGAAGTA
GGTCACAAAC TTGGCGATCA GGCATCGTCG ACTGATATTG ACCTCGAATC GACACCACGA
TTGTTAATAT ATGGTTTTGA AGCGCTGGTA GGTATTTTCC TGCAGCTCGC CGACGAACTA
GAACTCATAT CAACTTTTGC AAGAAAGAAA GACGCCGCAG CGATCAGTGC ATTGCAAGTT
GTATTGAGTT TTGCACCCAC CTTGGACGAT GTCTTCGCCG AATTGAAACC AATCTTGCAA
CATTTCTTAG AAGAAGAACT TGACGAAGAA ATGAATGACT TCCTGTACGG AATGAATTTT
ATAGTGGACT TGCTGTGCGA GCTTACTTAT CGAGTAGGGG AGAAGCAAGA GTGGAATGCG
AGATCGAACA CGTCTTTTTC GACTCTTATT GAATTACTTG CCCGTGATCT TCTCGAGGTT
GTGTCGATTT TCGGTGATGT CGACACACCT GACTTCGAAG TTTCTGCCCA ATTGCAGGAT
GCATGGGAAA CGACCGGGCA TGAGGAAGAA TTCAAGACAT TGGAGGTAAC GAATGATTTA
GATATGTTTC GTCAGATCTG CTACGAGGTC ATGATTAGCA CTGATCAATG GTGCCCTGAC
ACAACTACTT TGATGCACAT TTGTGGTATC GACCAAGGAA TCCTTGACGA ACAGAGTCTA
CAACCCAGTC CTGATGATCG CTTGGCGCCT ACACCAGAAC AGGCGATACA TGTCCTCGAG
AAGATCACGG GGGACCCTCT GCCTCGATTG AGTACATTTG CAAGCGTGAT GCGAAGGATA
ATGCCAATTC AAGCAATTTC TGACCCGAAA CTGACCGACC GCTTTGCAAG CGTCCGGAGC
AATGTAAGGA ATCCCCTAGG CTTGTCTTCT TCTTCCAATC TTGTTGCGAT CTCGTCGGTG
CCTGAAATTC TGTACGACCC AAATGCACTA GGAGTCGCTG GAGTAGGGAA GACTACTCTT
GCCGCCATGG TCGCCGACCA CGAAGATGTC CGCCGCTTTT TTCACGATGG AATTGCATGG
CTTCATATAG GTCAAAAGGA GCTCAATTAC ACAAGATATG TCCAGTGCTT GCGTGATTTG
GTCGCACAAC TTGGTGTCGA TGAACACGAT GAACCGCTGT TTCCAGAGCT ACTTAACACT
CCTGGAGAAT CAAAAGCTAA ACGGCGTCGG CGTGAAGAAG GATTTATGAT ATTTGTGCGG
GAGACTATGC TGGAATTTCT CCGATACAGA AATGTACTAA TTGTATTGGA TAATGTTTGC
TTCGAGCCTG ATCTTGACTG GTTTGACTTC GGTCCTTCTC CTGTAGAAGG TGACCAGGAA
AATGAAGAAG AATTTGCATG CGTGGTTTTA ATTACAAGCA GATGCCGGAA TCTTCTCCCT
GCGGCGGACA CGATTGAGGT CGACATGCTT GACGAAGCTG AAAGCATTAC ATTGTTGATC
CAAGAGTCGG GGAAACTGCC TCACTCTTTA ATGGCAGGGT CTCCGGAAAC CAGAGCAGTT
GTTCTCGAAT GCGCAAATCA TCCGTTGGCC GTGAAAAGCG TTGGGCGCTG GTTAAATCTC
AAACATGCGA CTGCAGGCGC GGTTAGTAGC GTAGAAGAGA TTCATGAGGA CGTTGTGAAA
TCCATGGAAA ATGTTCTAAA AACGGGAGGC CAGGAGGATG CTGATATGAT GTACGAGATT
TTGAACATGA GTCTTACCCC TTCAATGAAT GGCGAACCAA CAGTCATTAT CAAGTTTTGC
TTTTCAGCAT TTGTGCTGGT ATTTTGCGAT CAGAAACTAT TATCTGATTT CGCGCTTGCA
GACTCGTCAC CGATAATTCC CATCGAAATA GCAAAGCTTC TTTTTGAATC TATCTTGGAG
CTCGAGGAGG AATGCTTGCT TAAAGAGGGT AGTCTATTTT GTGGTCAAAA AAATGAAGCA
ACAGATTTAA TACCAGAGGC TTTGAAAGCT CTTGGAATCT TCAAGGAAAT TTCTACTTTT
TCCGAGTCCG TTGAAAACGG ATCACAAAAT GAAGAGACTG AAGAGAAATA TTTACAAATC
ATGCATATCA TTCAGCAAGA ATACGGTGAG TACTTACTTT CAGAAGACCT CTCACTCCAA
GATATCACCA GAGATGCTGA GAGGCGCTGG AATCGAGCTC TTGGGGAAGC GTACATGGCA
CAAAATATAT ACTGGGACAG AGATGCTCCC GGAGCAGGAC TTGACTATGC ACTTGAATTG
ATGCCTTCTC ATCTGATTAG AGGCCAGCTC TTGACTGAGG CCGCGGACTT ACTTTCAAAC
GAAAGTTTCG TGCGTGGGAG GCTTTTTGCC GTAGGGCGCG AAAACGGTAC ACGACGCCAC
ATCATGGATT GTGAGGCCCT TTTCGCCGCA ATGGTAGAGC ACCGCACTAT TGGTCGGAAC
AAACTTGATC CAAAAGCTAC AATAAAGAAA GCTTATCACG CTTTAGGAAG ACAGCTCACC
ATGGATGAAG ATGACTACAT TTCAGAAGAA AACTCTCCAG AAGCCGTGGA AGTCGGTCGG
GCACATTTTG AAATCGGATT TTCGTTAGCT GAGAAACGGT GCTGGGATAC AGCAATTGAG
CATTGGGAAA AAAGCCAAGA GCTTATTGTT TCTGCGCTCG GTATGGTTGA GCTTGTCGCC
GGTATACTGT ACAACATTGG TGTCGTTTAT ACAGAAACAC ACGAGTATGA GCAAGCTCTC
GGCTCGTTGA AGCAATGTTT GAAGATTCGA GGGGCTATAC ATGGAGAAGA ACACATTCTA
TACGCTCAGA CTATTCAAAG GATTGGAGAT ATCTTTCTTG GAATGAGCGA CTACCACGAA
GCGATGGAAA GCTATAACTG GGCTCTGGAT GTCATGCACA TTGAACCAAG TCATCACCGG
ATTGATATAG GCGACATCCT TGAGAATATG GGGAACATCC ACTTTTGCAA AGGAGAGTTG
GACGAAGCCG TTCAGTGCTA CCAAAATGCG TTGCGTTCCA AGCAATTGGA TCTTGGAGAG
AACCATCCGG AACTCTCGAC GTTATACCAC CACACCGGTA ATTGCTTATC CGACCAGGGC
AAAAATGACG AAGCCGTTGC TCTTTTTGAA GAAGCTATTC GGTTGAAAGA ATTTGACCCA
GACGGCGAAT CTGGCCGAGA CGCGGAGGTG CTTACGATCA AAGGGGTGCT CTTTATTTTA
AGCGGAAAAC AACAAGAAGG TCTAGAGTGC TACGAAAAAG CCCTGCAAGT CTTGGTGACA
AAGGCGTCTC ACAAGAAGGA AGAGGTGGCA TCGCTGTTGC ACCTGATCGG ATGCGTCTAC
TTACTGAATG GTGAACAGAC GAAGGCGATG AAACTCTTCA AAGAGAGTCT TCAAGCGAGA
CGTAAAGTCC TTGGATTTGT TCATCTAGAT GTCGCCGCTA CGCTGTTCAA TATGGCATTT
GTCCATCAAA CCCGCAACCG CCCGGAAAAG GCTCTCAAAT GTTTGGAAGA GGCACTCAAG
ATTCGTCAGC TACGGCTTCC CGACGGCGAA AAAGTTGCCG TGACCCACGA GCGTATCGGG
GCCCTTGCTC GATCAATAGG GAAGTCCAAG AAAGCTGAGA TTGCCTTCAC TGAAGCGCTT
CGTATAAGGA AGGTGATTCA CGGCGATAGC CACGAGGCGA TTGCTTCCGT TTTACAGGAG
CTCGGCGATC TCATGCACGA TCTTGAGGAA TATGAAGACG CTATGAAGTA TTATACTGAA
GCGCTAGATA TTCGCCACGA ACGTCTCGGC CCTACAGACT TGGCAGTGGC AGAAACGCTA
TATAGTATGG GTTTTACGCT CCAAGCAAAC GACGCTTCCG ACCGCGCCTT GGCGTTTTTT
GATGAGTCTT TGCAGATCCG GACGAAGCAT CTTGGCGAAG ATTCGAATGA GGTTGGGGAC
ACATTAAATA TGATGGGTTT CTTACAGGTC AAACGAGGTG AATTGGATGA GGCCCTCGGG
TTGTTGTGGG AAGCACTACA GATCAGAAAA CTCCAGAAGG ACTCGATAAA GGTCTCTGAG
ACGCTAAAGA ACATTGGCAA TGTTCACCGC GAAAAAGAAG AGCACGATCT TGCTATAGAG
TGCTACGAAG AATGTCTTCG AATCCGACGA TCTGAGCTCG GCGACGAACA CGAAAAGGTA
GCCGACGCTT TGATTGCGAT TGGAAATGTA TACAGCGATA TAGATGAGAA AGAAGAAGCC
AAGGAATGCT ACAAAGAAGG TTGGTTTCAG TGATCCATGG CGTGGCTTCG AGCAGTCAAG
AAGTACACTA ACATTTGTCC TCTCACTCAC AATTTTTTCC TCAGCCCTGA CGATTCGTAC
CATCTGTTTC GGTGAAAATG ATGAAAGTGT CGCGGCCGTT CTCCAATACA TGGGGACACT
AGAATTTCGT GCGGGGGAAC TGGATCGTGC ACTGCAACTT TTATCGGAAT TCATCCGCAT
TCGTAAGAAT AGCCAAACGG AAAAGGATGG CGACTACGTC AATGTACTCT TCATGATGGG
CAACGTACAC AAGATGCAAG GGAGTGAAGA AGAGGCCCAA AAGTGTTGGA CGGAAGCTTA
TGAAGTGTTC CAAGGGTTAG GTCTAGTTGA GGACAATCCG GAAATTGCCG AACTGATGGG
AAATCTGCTG AAGGAGCACG ACGATAGCAG GCCGGAAAGA CCGCATGAAC ACGGCAATGG
CAAATTTAAA AACATGCTTG GTCGGCTCAC CGAAAAGATG AAGGGCACCT TTAACGAAGC
CAACAAACTT GGCCACGGAC GCAGCAAGAA TAGGGGCCAC CAACTATGAA CTACACTACT
TTTCGTAATT CTAATAAGGA CTTTTACTCA TG
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| Protein sequence | MRDDDNDKDT GSSSSEHSVS ESSRAEGLID PEFHSDESYS ESVSSSEEQS LDPKSRPSSP
EHLVDKDASS EGEYSGESTS YNSEQSRSQN SFESGSYDSA SRSYESRTSK SFSDENSYFS
GSEAGSLGSR SYDSQASVSH SGAEESYESD GRDDHYCSDQ DNTSRSPCFK NNLVQEIQDG
SYTGSYSGDD QSYDFRKREE DEMISTYAED FHDSRVRSVS DCDESSVSHS SSCTGSSPAE
ESYTSNRSED DPVRKVYGLK TARADEDRFQ SSKDSSFQSS FANSALSSTP SFAVDSDSET
YAAKDPFQTR FHPKELRASV GGDNANKSSG PGFLAKGDVN DFQPAKRVSA VESKLPYQED
VPTNASGDCS SSGDTDSFAD DIKVADSSGS NESSIGIEDL QENSETDEYE SGSIYEESQP
QQSNRHGPYT QRVEINRANT TCEKQRSCSE CSSDGQSFAS ERVTEEDNED HAIYFGTALP
QGIDQSLPGH EQKKLDNDFS RNSEISKTLS VSEASTIDDS HGKASLRSAH TLEVGFENSF
GDSFASTFDN TDPFGDVFGS GSFHPDESFG GSLLSKDEPL GKITEHSVEQ SSPDYSGTSE
VIGSPYSQKF DSRVHHDGER SLLGGGSSVE DSTGIENSVK REGSRRNLGK RTSANALNIV
SPSSPLEDIP QIFPVTVSGA EEENETIALA SKQYNRYSRE QMSKLANAPQ YPYEGDEFNR
SPRSPNEKSK KKRRRREKFK STELLDLVAN VNDAIVRLEV GHKLGDQASS TDIDLESTPR
LLIYGFEALV GIFLQLADEL ELISTFARKK DAAAISALQV VLSFAPTLDD VFAELKPILQ
HFLEEELDEE MNDFLYGMNF IVDLLCELTY RVGEKQEWNA RSNTSFSTLI ELLARDLLEV
VSIFGDVDTP DFEVSAQLQD AWETTGHEEE FKTLEVTNDL DMFRQICYEV MISTDQWCPD
TTTLMHICGI DQGILDEQSL QPSPDDRLAP TPEQAIHVLE KITGDPLPRL STFASVMRRI
MPIQAISDPK LTDRFASVRS NVRNPLGLSS SSNLVAISSV PEILYDPNAL GVAGVGKTTL
AAMVADHEDV RRFFHDGIAW LHIGQKELNY TRYVQCLRDL VAQLGVDEHD EPLFPELLNT
PGESKAKRRR REEGFMIFVR ETMLEFLRYR NVLIVLDNVC FEPDLDWFDF GPSPVEGDQE
NEEEFACVVL ITSRCRNLLP AADTIEVDML DEAESITLLI QESGKLPHSL MAGSPETRAV
VLECANHPLA VKSVGRWLNL KHATAGAVSS VEEIHEDVVK SMENVLKTGG QEDADMMYEI
LNMSLTPSMN GEPTVIIKFC FSAFVLVFCD QKLLSDFALA DSSPIIPIEI AKLLFESILE
LEEECLLKEG SLFCGQKNEA TDLIPEALKA LGIFKEISTF SESVENGSQN EETEEKYLQI
MHIIQQEYGE YLLSEDLSLQ DITRDAERRW NRALGEAYMA QNIYWDRDAP GAGLDYALEL
MPSHLIRGQL LTEAADLLSN ESFVRGRLFA VGRENGTRRH IMDCEALFAA MVEHRTIGRN
KLDPKATIKK AYHALGRQLT MDEDDYISEE NSPEAVEVGR AHFEIGFSLA EKRCWDTAIE
HWEKSQELIV SALGMVELVA GILYNIGVVY TETHEYEQAL GSLKQCLKIR GAIHGEEHIL
YAQTIQRIGD IFLGMSDYHE AMESYNWALD VMHIEPSHHR IDIGDILENM GNIHFCKGEL
DEAVQCYQNA LRSKQLDLGE NHPELSTLYH HTGNCLSDQG KNDEAVALFE EAIRLKEFDP
DGESGRDAEV LTIKGVLFIL SGKQQEGLEC YEKALQVLVT KASHKKEEVA SLLHLIGCVY
LLNGEQTKAM KLFKESLQAR RKVLGFVHLD VAATLFNMAF VHQTRNRPEK ALKCLEEALK
IRQLRLPDGE KVAVTHERIG ALARSIGKSK KAEIAFTEAL RIRKVIHGDS HEAIASVLQE
LGDLMHDLEE YEDAMKYYTE ALDIRHERLG PTDLAVAETL YSMGFTLQAN DASDRALAFF
DESLQIRTKH LGEDSNEVGD TLNMMGFLQV KRGELDEALG LLWEALQIRK LQKDSIKVSE
TLKNIGNVHR EKEEHDLAIE CYEECLRIRR SELGDEHEKV ADALIAIGNV YSDIDEKEEA
KECYKEALTI RTICFGENDE SVAAVLQYMG TLEFRAGELD RALQLLSEFI RIRKNSQTEK
DGDYVNVLFM MGNVHKMQGS EEEAQKCWTE AYEVFQGLGL VEDNPEIAEL MGNLLKEHDD
SRPERPHEHG NGKFKNMLGR LTEKMKGTFN EANKLGHGRS KNRGHQL
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