| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43023 |
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| Symbol | |
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| ID | 7196829 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1822796 |
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| End bp | 1824707 |
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| Gene Length | 1912 bp |
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| Protein Length | 524 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177380 |
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| Protein GI | 219111257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000014504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TACCATGACA TTTCCAGTAG TGCTTATACC ATCGCCTGTT CACGAGGCTT TCGGAAGTAT
TCAATGGGAT TCATTTTTAC ATTTAAAGCT TTCTAATCCA GAAAAAGCGC TTTTACAAGC
CGGAGAACAG AACGTTATCG AGTAAGGCAT AAAGGGATTT GTCGTACAAT TTGAGAAGAA
TATCTGGACG TCTTACACTC TGTTTTTCTG GAACACAGGT ACACGCTGTA CGACAAAGAA
GATGCTGCAG CTTATGTGCA GCTCCTGCTT AAAGTTCTCG ATCAAATAAC TAGTCATCGT
GGAACATCGT CGCGTCGAAC GTCACTCAAA GTTTCCAAGC TCTCCTTGGC CGAAAGTTTG
CCACCCGTTG ACGCGCTGCA GTACCTCGAC TGTGACGGCA TTGGAGTGGC CACACACTAT
GTCATCTCGC AACTTTATGA AGTCATCACG ACACTCAAAA GTAACGCTTT CGCTTCACGG
ACCAAAAGCA ACAGTGTCGT TGCTAGCAGC AACTTTGTGT CGAAAGCCAC TTTGTCCAGC
ATATTCTATC CATCAGGCAT TTTGATTGAC GACTGGCGAC CTCTTTTGCG TATTCTACTG
GGTACAAAGA GCGATTCTTA TGTGCACAGT ACGTTACAAC AGATTTAGTG CTTAAAAATT
GTTTTTATCC GCTTTAACTC ACCTTGACTT TTTCTCTGAA ATTATAACAC AATCAACGTC
AAGGAGGATC AGGTTTCTGT CTGGCGTGTA TCCTCTTGGA AGGATGCACT CTGCAAACAA
ACGGCCATCT ATTTTCGCCA ATATCATCAA TTTTGGAATC CTTTGTTTCG TGGATTGTGT
CTCGGCTACA GAGTTCTAGC ACACAATCTC TTTCTATGGT TACCTCAAGC TTGACTGTCA
TCATCTTGTC AAAAGAAGTT CGGCATCTCT TTGGCAAAGC GGGAGGTGTT GGATATCTGA
GTCGGCGCTT ACGCGTTCAT CAAAAATCAA TTGATTCAAA GATTAGTGCT TCCGTGCAAC
ATCAATACGA ACTCTCCTAC TGCCTCTGGA TCATGTCGTA CGATTGTGAC ACATCGGTAT
CAATGCGAAG CCACTTTCAT AGAGACGGAT CAGTCCAAGC ACTGGTAGAT ATGGTGGCCG
CTGCACCTCG CGAGAAGGTT GTGCGGTGTG CACTAGCAAC CCTGCGTAAT TTGGCAACGT
GCGCTGCGGA CGAAGCGCCT TTGGAATTGG CAAAGAAAAA CATCAATGGT TCAACATATT
TGATTGATAT GATAGGTTGT GGTCTACCCA AGTTGATTGA CCTGATGATG AATTGCCCAA
TTGCTGACTT CGAGATTAGC GAAGGTATGC AATGTTCGGT CCCTTCCCCA TTTTCAAAAG
CGGAACCGTA TCTAAACAGG TTGATGATTT GTGTCTCCTA TATGACAGAC TTGGACATTC
TCCATAAACT TTTGCACGAA ACTTGTCAAG AGCTAACACG TTGGGACGTC TATAAAGTGG
AGCTTGATTC CACTAACTTG ACATGGGGGA TAGTCCACAC CGAAAAGTTC TTTCGCGAAA
ACGCCCGAAA AATGGAAGGA TCCGATGGAA AGTTTGAAAT GGTGAAGACC CTAATTCAAT
TGACTGCATC GGATAGCGAG GATGTCGCCG CAATTGCTTG CTTTGATTTA GGGGAATTTG
TTCGTCATTA CCCTAATGGA AGAGACATTG CTCGGCGCCT TGGTGCGCGG GATTTTGTTT
TCCCGCTCAT TGAGCACGAA AATCCCAAAC TACAGCATCA AGCATTAACT TGTATCTCAA
AATTGTTAGT CCAAAATTGG AAGGTGAGCA GTTACATTGA CAGAGATAAA CCTGAATGTG
TTCCCCTAAC TCCAGCACCC CTACCTCTTG GATCTTGCAG TCATTAGGAT AA
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| Protein sequence | MTFPVVLIPS PVHEAFGSIQ WDSFLHLKLS NPEKALLQAG EQNVIEYTLY DKEDAAAYVQ
LLLKVLDQIT SHRGTSSRRT SLKVSKLSLA ESLPPVDALQ YLDCDGIGVA THYVISQLYE
VITTLKSNAF ASRTKSNSVV ASSNFVSKAT LSSIFYPSGI LIDDWRPLLR ILLGTKSDSY
VHRGSGFCLA CILLEGCTLQ TNGHLFSPIS SILESFVSWI VSRLQSSSTQ SLSMVTSSLT
VIILSKEVRH LFGKAGGVGY LSRRLRVHQK SIDSKISASV QHQYELSYCL WIMSYDCDTS
VSMRSHFHRD GSVQALVDMV AAAPREKVVR CALATLRNLA TCAADEAPLE LAKKNINGST
YLIDMIGCGL PKLIDLMMNC PIADFEISED LDILHKLLHE TCQELTRWDV YKVELDSTNL
TWGIVHTEKF FRENARKMEG SDGKFEMVKT LIQLTASDSE DVAAIACFDL GEFVRHYPNG
RDIARRLGAR DFVFPLIEHE NPKLQHQALT CISKLLVQNW KSLG
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