Gene PHATRDRAFT_42953 details

Gene Information

• Locus tag: PHATRDRAFT_42953
• ID: 7196782
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1616609
• End bp: 1618699
• Gene Length: 2091 bp
• Protein Length: 557 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002176818
• Protein GI: 219110133

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.677298
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTCT TTCGTCTCGC CATTTTCGCC GTCTTTGCGA CCTCTGTGCA AGGCAAAACC 
AACGAAGATC AAAAGGCAAC TAGTAAGCTT ATGGTGCATG TAAGTTGCGT AAGATTTTGA 
GCTGTTCTTC ATCTATCGGG ATTCACTTTT TGAATCAACT ACTATTTTCG CTACGTTGAG 
GAAGGCGAGA AATGTAATCA CGTTGATGTC TGAAGCTGCC TTTAGGAATC AAATTGGTCA 
AAATTGTAAC CTTTCTGTAT CAGGATGAGT TGTAATAAGC TTTTGATGGT TCCAGACCTT 
CTTTTCAGTG CATGAAACTG TTTTTCGACA AGTTTTTTCA AATCCCGTTG TCCAGTGTGT 
ACGTGACAAA TACACTCACT TACTCTGTAT TGCTTATGCT TTCAGATTCC CCACATGCTT 
TACAAATCCG CAGGATACGA TCACCGCGAA GCTCTATTTG GCATGCCAGC GTATGGTGGT 
TCGATCTCTC AGAATGTGTA CTACGCCGAC AGCGACCTCT GTGATCCGTC CGAAGAAATT 
GAAGGCTATC CACAAACCGA CTCGGATGGC GACGACGACG ATGTAGCACC ATTTCCAGCG 
CCCTATATTC TCATGGTTAA CCGCGGAGGA TGTACCTTTG TGCAAAAGGT ACGGAAAAGA 
CGACGATAAA AATGTCCTTG AACCGGCGAA GTTCTCACCT TTTTCTCATC CACAATGTTC 
TCGGCGACAG GTGCGCAACG CACAGCACAT TGGAGCATCA GGTGTTTTGA TCGCCGACGA 
CACCTGTCTC TGTTCGGATA AAGTCTGTAT GGCCAACAGT GAAGACGACG AGGACGCCTG 
CCAAGTCAGC GAACCCATCA TGTCCGATGA CGGTTCGGGT GCAGACATAT CAATCCCGTC 
TTTCTTAATG TTCAAGATGG ACTCGGAGCG AATCATTGAA GAAGTCAAGA GCAATCGACC 
TGTTCAGGTT GAAATGGCTT GGAGTCTTCC GAACCCTGAC GATCGTGTAG AATATGATCT 
GTACACGTCC CCGACCGACT CCATTAGCAA ATCTTTTATC CAAAGCTTTA AACAGCTTGC 
GGTGGCTCTT GGAGGCCGCG CGTACTTTAC GCCGCATATG TACATTTTTG ACGGCATAAA 
ATCACAATGC CACGGATCGG ATGGGGAGAG TCATTGCCAT ACTCTCTGCA CCAACAACGG 
ACGGTACGCC ATATACGCCT CCAACCTAAG CTTGAGGCGA CAAGAATTGG ACACGCTTCT 
CACCCTTTCC TTTATCCTTT CCTATAGATA CTGTGCCACC GACCCTGATG GTGACTTGGA 
ACGTGGTATC TCGGGTGCTG ACGTTGTCAC CGAAAGCTTG CGTCGTATCT GCATCTGGAA 
TCACTATGGC GCCCCCAACG GTATCGGAGA AATCTGGTGG GACTACGTAA TCGAATTTGA 
ACAGCGCTGT GCCGCTTCAG ACTACTTTTC TGACACAGCC TGTATCCAAG AAGTGTACCA 
CCGCGCCCAG GTTGACGGTG ACATGGTCGA GCGGTGCATG ACGGATAGTG GTGGAACTAT 
AGCGGATGGG GCCAACACCA AGCTTGACTT TGAACTAAAC GCCCAGACGG ACCGGGGAGT 
AGTTATTCTG CCAACTACTT TCGTCAACAC GGCTGCTATC CATGGTGCCT TGACCCCGTC 
GAATGTTTTT AACGCAGTGT GTGCGGGTTT CGCCGATGGC ACAGCCCCCG AAAGTTGCAA 
CACGTGCAGT TCCTGTAAAG ACACGATTTT CTGTGTCGGT CAGGGGTACT GCAAAGCGAA 
CGATTCGTCC GGTGGCCCCG CGGAAAGCGG AGTATCTGGA CATGCCTTCG CGACTTCCAT 
GCTGATTGTG ATCGGGTGTT TCTCCACCTT GGGTGCGTGG TACTACAAAC GCACCAAGGA 
CGAGCTGCGA GACCACGTTC GTGGCATCAT GGCCGAATAC ATGCCTCTCG ACGACAACGA 
AGGAGACCTC GGAAATCCAA TGGATTTTTC AAACAATGGC GATGCGACCA CTTCACTCAT 
GATGGGCCCG GACTCGATTT AGAAAACCTC GTGCAGCGTA GACGATACGT C 

 

Protein sequence

MTLFRLAIFA VFATSVQGKT NEDQKATSKL MVHIPHMLYK SAGYDHREAL FGMPAYGGSI 
SQNVYYADSD LCDPSEEIEG YPQTDSDGDD DDVAPFPAPY ILMVNRGGCT FVQKVRNAQH 
IGASGVLIAD DTCLCSDKVC MANSEDDEDA CQVSEPIMSD DGSGADISIP SFLMFKMDSE 
RIIEEVKSNR PVQVEMAWSL PNPDDRVEYD LYTSPTDSIS KSFIQSFKQL AVALGGRAYF 
TPHMYIFDGI KSQCHGSDGE SHCHTLCTNN GRYAIYASNL SLRRQELDTL LTLSFILSYR 
YCATDPDGDL ERGISGADVV TESLRRICIW NHYGAPNGIG EIWWDYVIEF EQRCAASDYF 
SDTACIQEVY HRAQVDGDMV ERCMTDSGGT IADGANTKLD FELNAQTDRG VVILPTTFVN 
TAAIHGALTP SNVFNAVCAG FADGTAPESC NTCSSCKDTI FCVGQGYCKA NDSSGGPAES 
GVSGHAFATS MLIVIGCFST LGAWYYKRTK DELRDHVRGI MAEYMPLDDN EGDLGNPMDF 
SNNGDATTSL MMGPDSI