| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42828 |
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| Symbol | |
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| ID | 7196487 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1255253 |
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| End bp | 1257168 |
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| Gene Length | 1916 bp |
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| Protein Length | 499 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176749 |
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| Protein GI | 219109993 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGAGA GTACCCTTGC GAATAGTAGC ACTTTGGCCA CCATTGACAA GATCAAGTTC
ACTTGCAACC AGGATACATG ATTGTGGGAG TCACAATGCC ACAGGATCCC GGCATGGCAA
TACCTCCTTA TAGTCAGAGT GGGCAAGCGA ATGACGCATA TCCGGAAGGC GGCTCGGGCG
AGAAATTCGA CACGAGCCAG CCACAGGCCG TCGCAATGCC GGCCCTCCAA CCAGCAGTAG
ATGGTAATCT ACCGCCCCAA CAAGTCTTTG TGAAATCCCA TATTGACCCT ATGGGAAGCC
CGGAAATGCT TGGCTTGGAA GGTCAGTTCC AGTCTATCGG ATTCGCGCAA GAAGGATTCG
ATCACAATTC CAGCGCGCAC TACAATGGTG GCGATAGTAG TGGCAATGCC AGCGCCGACA
ACGATGATGG CGAAGACGAT CCCATGAAGC TTTTTGTTGG ACAGGTATGT AATAAGATAC
GGCTGGTCTC GCTTGGATGC ATCGAGTAGT GAGGGCTGGT TGGGTTCTGT GTATGAATCA
TTGTTCTACA TTGCTTGGAT GAAAAGCGGA ATGTCGTACT GTATTTCCCG TAAGCGAGAG
AATTTCGTGT CTCCTCAATA TCCGCTCATG TCTTGTACTT TCCACACAGG TTCCGAAGGC
AATGAGCGAG GAGGATGTGT TTCCAACGTT TGATTCGTTC GGTCCGCTCA AAGATGTCGC
TATCATTCGC GACAAGCACA CTGGTTTGCA CCGTGGGTGC GCGTTCGTCA CCTACTGGTC
GGCTGCCGAC GCAGAACGCG CGCAAGAAGC GCTCCACGAC ACCTTTACCT TCCCCGGAGC
GCGGAGAGCA GCACAAGTTA AACCTGCCGA ACCATCCGTC CCCGAGAACA AACTCTTTGT
GGGAATGCTT TCACGCAAGG CAACCGAAGT GGAAATTCGC GAGCTATTTG AACCGTTCGG
TGAAATTCGA GAAGTATACA TGATCCGCAA TGCTGACGGA TCTAGCAAGT GCGCAGCATT
TTTGAGATAC ATGAAACGAG GCGCGGCTGT TCAAGCCATT GAAACTCTTA ACAATATTTA
CATGATGGAA GGTGCAGCCA GGCCCCTCAT CGTTCGATTT GCGGACAATA AACATCAGCG
CCATCAGCGC CAGATACGAA ACATCAGAAG ACATGAAATG ATTGCAGCAA TGGGTGGCGG
CTATGCAACA TACCCCCCAC ATGTGCAGGT TCAGATGGGA ATGCCCGGGC ATCCCGGTGC
TAGTCCACAG TACACTGTAC CCGTACCTCC TCATTACGTT GAAGCTGCAT ACGGGCCACC
GAACGGTGCC CCAATGCCAG GGCATCCGTA CATGTACCCC CCTCAGCAAT ACGCTCCTAC
ACCAGCATAT ATTTACCCAG AACACACGTC TGAAGAAACT AAACCGACCA ATAACCGTCC
GCGTGAAGGC CCCGCTGGAG CGAATTTATT TGTATATCAT CTCCCTCATG ATTTAACCGA
CGCCGATCTA GCAACAGCCT TCAATCCTTT CGGGAACGTT ATTAGCGCCA AGGTGTATGT
CGACAAATAT TCAGGCGAAA GCAAGGGTTT CGGTAAGTTG CAGCACGCCT TCTGGTCTTT
GTACCCCTAT AAATGTCATT CTCACGCTCT GAAAATCCTT GCCAGGCTTT GTGTCGTATG
ACTCAGTTAT TGCGGCAGAA GCAGCAATCG AGCAGATGAA CGGATTTCAG ATCGGCAACA
AACGACTGAA GGTACAACAT AAGCGTGTTC ACGGAAACCA TCCGAATGCT CCGTCCTTAA
GCGATTCCCA AGACCCTCCC GAAGATTTGC TTTAAACGAC GCTTTCAACT TTTTCCCCAT
GTTGATATAT CCTTCCAGCC CTTACCACTG AAACGATCCA AACGAAACAA CAACCC
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| Protein sequence | MYESTLANSS TLATIDKINQ SGQANDAYPE GGSGEKFDTS QPQAVAMPAL QPAVDGNLPP
QQVFVKSHID PMGSPEMLGL EGQFQSIGFA QEGFDHNSSA HYNGGDSSGN ASADNDDGED
DPMKLFVGQV PKAMSEEDVF PTFDSFGPLK DVAIIRDKHT GLHRGCAFVT YWSAADAERA
QEALHDTFTF PGARRAAQVK PAEPSVPENK LFVGMLSRKA TEVEIRELFE PFGEIREVYM
IRNADGSSKC AAFLRYMKRG AAVQAIETLN NIYMMEGAAR PLIVRFADNK HQRHQRQIRN
IRRHEMIAAM GGGYATYPPH VQVQMGMPGH PGASPQYTVP VPPHYVEAAY GPPNGAPMPG
HPYMYPPQQY APTPAYIYPE HTSEETKPTN NRPREGPAGA NLFVYHLPHD LTDADLATAF
NPFGNVISAK VYVDKYSGES KGFGFVSYDS VIAAEAAIEQ MNGFQIGNKR LKVQHKRVHG
NHPNAPSLSD SQDPPEDLL
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