Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42712 |
Symbol | |
ID | 7196113 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 867510 |
End bp | 868404 |
Gene Length | 895 bp |
Protein Length | 219 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176670 |
Protein GI | 219109834 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG AAGCCCAAAC ACCGACGGAA ACTCCCAACG AGAGTCCTGC AGAGGTGGTT GAAACAAAAG AAGGTGGCGA GAATGTACCT GAAGAAGAGA GCACCGCTAC CTTTGAAGCA GTGGTAAGTG ATTTCGCTCG AACCGTGCTG GTCATTGCAC ACGCCTTTGC ACGCCGCTGT AGAAGCTGCG TAGAAACCCT ACCACAACCC TCCATTTCTT TGACTTTTCA TTCCTTTTAA CCTTCCTATC TTTCGTTCGT TCCGTTGTCA GGTCAAACTT GAAGAAGTTG AAGTGAAGTC GGGAGAAGAA GAGGAGGTAA GTGGAGAAGC ACCGTGGCTT GATCTTTCGG CTCTCCTCTT AAAAATCTCT ATTCCTGAAA CTCGTTTGCT CCTGTTTTCT TAGGAAGTTC TATTTTCGCA ACGATCGAAG CTGTTCATTT TCGGAGAGAC CTTGCTAGAT AAAGGGACCG GAACTAAGTC ATGGCGAGAA CGAGGAATTG GAGACATTCG CATTTTGCGT CACCGTGAGC ATCAACGGAT CCGCGTGTTG ATGCGCCAGG AAAAGACAAT GAAAGTGATT GCCAATCATG CATTGGACCC TCGCTGTGTA CTGAAACCAA ACGCTGGAAA CGACCGGTCT TGGGTCTGGT CAGCTTTCGA TTTCGCTGGA GGAGAGTTGG TCGAAACCGT TTTTGCCATT CGTTTCGGCG ACTCGGACAA AGCACTGGAA TTTAAAGCGG CCTTTGAGAA ATATCAAGGT GAGATGCAAG CACTTTTGAA CGGTGAAGAC AAGCCGGGCG AGGACGGCGG AAAAGCAGCC GACGAAGCGG CGGAAGCGCT TGCCGGTCTA TCGACCAAAG GCGAGGAGAA GGCAGAGGAA CCCTCAGAGG ATTAG
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Protein sequence | MSEEAQTPTE TPNESPAEVV ETKEGGENVP EEESTATFEA VVKLEEVEVK SGEEEEEVLF SQRSKLFIFG ETLLDKGTGT KSWRERGIGD IRILRHREHQ RIRVLMRQEK TMKVIANHAL DPRCVLKPNA GNDRSWVWSA FDFAGGELVE TVFAIRFGDS DKALEFKAAF EKYQGEMQAL LNGEDKPGED GGKAADEAAE ALAGLSTKGE EKAEEPSED
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