Gene PHATRDRAFT_42712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42712 
Symbol 
ID7196113 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp867510 
End bp868404 
Gene Length895 bp 
Protein Length219 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176670 
Protein GI219109834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG AAGCCCAAAC ACCGACGGAA ACTCCCAACG AGAGTCCTGC AGAGGTGGTT 
GAAACAAAAG AAGGTGGCGA GAATGTACCT GAAGAAGAGA GCACCGCTAC CTTTGAAGCA
GTGGTAAGTG ATTTCGCTCG AACCGTGCTG GTCATTGCAC ACGCCTTTGC ACGCCGCTGT
AGAAGCTGCG TAGAAACCCT ACCACAACCC TCCATTTCTT TGACTTTTCA TTCCTTTTAA
CCTTCCTATC TTTCGTTCGT TCCGTTGTCA GGTCAAACTT GAAGAAGTTG AAGTGAAGTC
GGGAGAAGAA GAGGAGGTAA GTGGAGAAGC ACCGTGGCTT GATCTTTCGG CTCTCCTCTT
AAAAATCTCT ATTCCTGAAA CTCGTTTGCT CCTGTTTTCT TAGGAAGTTC TATTTTCGCA
ACGATCGAAG CTGTTCATTT TCGGAGAGAC CTTGCTAGAT AAAGGGACCG GAACTAAGTC
ATGGCGAGAA CGAGGAATTG GAGACATTCG CATTTTGCGT CACCGTGAGC ATCAACGGAT
CCGCGTGTTG ATGCGCCAGG AAAAGACAAT GAAAGTGATT GCCAATCATG CATTGGACCC
TCGCTGTGTA CTGAAACCAA ACGCTGGAAA CGACCGGTCT TGGGTCTGGT CAGCTTTCGA
TTTCGCTGGA GGAGAGTTGG TCGAAACCGT TTTTGCCATT CGTTTCGGCG ACTCGGACAA
AGCACTGGAA TTTAAAGCGG CCTTTGAGAA ATATCAAGGT GAGATGCAAG CACTTTTGAA
CGGTGAAGAC AAGCCGGGCG AGGACGGCGG AAAAGCAGCC GACGAAGCGG CGGAAGCGCT
TGCCGGTCTA TCGACCAAAG GCGAGGAGAA GGCAGAGGAA CCCTCAGAGG ATTAG
 
Protein sequence
MSEEAQTPTE TPNESPAEVV ETKEGGENVP EEESTATFEA VVKLEEVEVK SGEEEEEVLF 
SQRSKLFIFG ETLLDKGTGT KSWRERGIGD IRILRHREHQ RIRVLMRQEK TMKVIANHAL
DPRCVLKPNA GNDRSWVWSA FDFAGGELVE TVFAIRFGDS DKALEFKAAF EKYQGEMQAL
LNGEDKPGED GGKAADEAAE ALAGLSTKGE EKAEEPSED