Gene PHATRDRAFT_42481 details

Gene Information

• Locus tag: PHATRDRAFT_42481
• ID: 7196047
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 180837
• End bp: 183098
• Gene Length: 2262 bp
• Protein Length: 332 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002176537
• Protein GI: 219109565

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00503465
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTTGCAGTC TATTTATATA GTTATTCTTG TTGATATTCA ATGCCATTCT CGCGCATCAG 
TGTCTCTAGC TCACGCTTTA CAAAAAGAGC CTCTTCCATT CGACCCTCTC GTAGCTTGTC 
GTTCAGATCT ATACGCAATC CGTCCAGTCG ATCCATCAAT TCCTGCTCGG CCTTGAGGAC 
GGCCTCGTCC TGGCCAGCGA CTTGGACGAA ATTCAGTCGT GGAAGTTTCA ACCACGGCAG 
CGGATCAGTT CGGGCGAGGG TACGATCCTG ATCCGCCAAC GGTTGGAATC CCGACTTTGA 
ATACCCGCGT CCGTCCTTCA AAAAGGCACT CAGGCCCTGC TCGCCTCGCA GTTGCTCGTT 
GATCAGACCT TGTGCGGCGG CAAACAAACC CAGCGTAAGC ACAATTATCA GCGGAACGAA 
GGGAAGATCG CCGTCCATAA GAAACCAGTC GTCGAATGGG TTTGCGCACA GCAACATTCG 
TTCAGAAGAG CGTTTGTATG GCCGTAGCAA CCATGTACGC GGTGGTATGA CATGCGGTCC 
CACACTGGAC AATGAACGGG TTGGCAGTAA CTGTCGCCCA TCTTTCCCCG AAAGTCTTGT 
ATGTGGAACC GTGTACACCA GCCAACCGTA ACTTGATTGC AATAGTAAGA AAATAAAACC 
CAGAGCATTT AGCCTTTGCA TGGTAAACTT TCCGAACTTT CCGAAATGAT CTGCAAAGCT 
GCTTCGTCGT ACGTGCACGT ATTGTCCGCG CTGAGCGTTC GCGCGCAGAC AGTGCCTCCT 
CCCAGGCACT TCTGGCTAAC GTAAGCTGCC AATACAATGA AGATCAAAAA TTGCGTCTAG 
TATTGTTCTA CTGGGGACTG TCAAAATTAT TTTCGTTTCA CACACTTTCC AATTCCTGGA 
CGTCGTCGAG AGAGGATCAC ACCAACAAAG ATGACGGAAA TTGTAAATTC AATTTTCATT 
GTATCGCCGA TAGTCGGACG AGCTGCAGAC AGACCTTCAG AAAAACGAGC CCAAAGAAGA 
TACGCAAATC CCTTTTCGAA CGAAATATGA TTTTCACACG TCAATAGTCA AACGTTGCGT 
TCGCACTCAG AAGAAGGTGC TGGAACTATG GAACTGGCCA GTAAAGAGAC GAAAGGGATA 
TTGATCCTGC ATCGGAGGTA TGAGGGCAGT CTGCATTTGC ATATCGTGGG AAAGGCAGAA 
TTTGCTGACT GCGAACCCGT GGCTTGCATG TATTTTCCAA CTTACTTCTC ACTCGTACGC 
ATGTGTTTGC TCGTTCTACG CCTCGTAGTG GTGTTAAAAT CAAGACTTCA CAGAAGAATA 
AGGATCACCC GCCGGTCCTT TTACTCTTGT CCGGATTCCC AGATACCGCC GACACCTGGG 
ATAGATTCGC GGCTCCTTTC GAATCCAAGT ACCATGTCGT CAAAATGGCA TACCCGGGAA 
TGGAGGTGCC CATCACCAAG TGGTGGGGAT ACTCGTTCCC AGAAGTTCAG GATGCCCTGC 
TGAATGTGGT GCAAGGATAC CGCGACATGG GCTGCGAAAA TGTCTACCTG GTGGGACATG 
ACTGGGGAGC TATCGCGTCC ATCATGTACG CCAACAGGTA TCCTTCGACA ATCACCAAGC 
TCGTTCTGGA AGATGTGGGA GTTGTCTCGT TGTCTGAAGT TACATTTTCC GAAGCGATGG 
TTACGCTGAT CTATCAATGG TTCCTCACTT TTTTATTCCT ACTGTCAAGA TTTTTTCCGG 
GCACTTGGTG GTTTCATTTT TTGGTGAACC ATTTTCCGTG GGCGACACTT GGACCTGATC 
CCAGCCTACG GGTACAAAAA AATCTCACCA AGGTACAACC GTGGCAGTGC CATCCCTATT 
GGCAGCTGGT GATGTTCGTA CTTCGAGCAA GGAACTTATC CGTGCTGCGA TTTCCTAAGG 
ACGTGGCTAT CCTCTTTGTG TATGGGAAAC ACAAGAATTG CTGTTTCCAC GGTCAACGAT 
TTCTAAACAA ACTAGATCAG ATCGCAACTT GTCGTCAGGT TGGCTACGAT ACGGGCCATT 
GGGTCCACGA AACGGAACAC GAACGGTTTG CAGCTGATGT GCAAGCCTTT TTGGAGTCGT 
GAACGTCGTG GTCGGTGGTA TCCAGGGCTG TGACTGCTTC ATAGTTGAAA GTGTGTGACG 
ACAAGACGAA TCCCTCAACA AACTTCATGT TGTTTTTCTG TCACAGGAGC AAGAAAAGAC 
GTGTATCATA GAAAGAGTAC TGTAAATCAT GTATTGTTTA TT 

 

Protein sequence

MICKAASSYV HVLSALSVRA QTVPPPRHFW LTQTLRSHSE EGAGTMELAS KETKGILILH 
RSGVKIKTSQ KNKDHPPVLL LLSGFPDTAD TWDRFAAPFE SKYHVVKMAY PGMEVPITKW 
WGYSFPEVQD ALLNVVQGYR DMGCENVYLV GHDWGAIASI MYANRYPSTI TKLVLEDVGV 
VSLSEVTFSE AMVTLIYQWF LTFLFLLSRF FPGTWWFHFL VNHFPWATLG PDPSLRVQKN 
LTKVQPWQCH PYWQLVMFVL RARNLSVLRF PKDVAILFVY GKHKNCCFHG QRFLNKLDQI 
ATCRQVGYDT GHWVHETEHE RFAADVQAFL ES