| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42439 |
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| Symbol | |
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| ID | 7196624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 54762 |
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| End bp | 56537 |
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| Gene Length | 1776 bp |
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| Protein Length | 570 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177008 |
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| Protein GI | 219110513 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00659721 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGTGGTCGAA AGGCACTGTC AGTAAATAAC TTGATAAGCT GATCCAGAGA GCCCCCACAA
ACGATGGCAG CCAACTCCTT GACTCCTTGG ACTGATCTCA TTTTGTCCAA TTCAGAGAAC
TTTTCATGCC AACGTCAGTT TCCACGAAGC GCCCCTGACC ACGAAAATGT TGACAATGAG
CAATCTACGG AGCCTTGGCC AAATCCAGCA ACGGATCATA TCGCCGAGGG ACATGGCGAC
GATAAGGTGA ATTCGCAACC CTTTCATGAG GACTCAATGT CGAGAGACTT GATGGCGGAG
CCAATCACTA CCGGCGCAGG GTTCAAGAAA GCCTTTTGGA AGTCATCTCG CTTCAATACC
TCGTCAAACA GCGTTTCCGA TCAAAATAAA GGCGTTGCCA ACACCGATTC CCTTGAAGAA
AAGACTCAAG ATTCTTTTCC GCAAAACGAT TTTGACGCCT CCTTCTCTGA TCTGGCTGAC
ACACATGACT ACATTTACCC TTTGGAGGAT TCATTGGCTG AACAGCCAAA CACCGGTTTC
GCTTTTCGTG CGGAAAAATC AAAACAGAAA CTCGTCGATG GAGAAGAGCA TGGCTGGACT
ATTGCTGGTG CACAGAGTTC CTCGGCAACT ACTCGGTCCG CCGCAGAGTG GGTCGAAAGT
ACTTCACACA CTAGCGACTT TGAATCTCAT ATACTCACTG AAGAAGTGCA TCAAGCCCAA
CAAAAAAGAA CGAATCGTAC TTGGTTCACT CACGCAATTG CACTTGTCTT TACGACTATG
ATGCTGGTTG AGTTGGGATT GAGCGGCTGG AGGTTTGCTC CGTTAAACAT CAACCCACTG
ATTGGACCAT CGTCCGAGCA GCTCATAGAT CTTGGTGCAC GTCAAACGTC GTTGATTTTG
GAGGAGGGGC AGTGGTTCCG TATTGTTACA CCTATTTTTC TGCACGCTGG AATAGTGCAC
TACCTAACCA ACATGCTGGC ATTCTGGTTT ATTGGTGGTG CCATCGAGGA AGCGCACGGA
ATTGCTACCG CCATAGTGCT GTTCTTCATT CCGGGCGTTG GCGGGAACAT TTTGGGGGCC
ACGTTTTTGC CTCAGTACAT TAGTGTGGGA GCTTCCGGTG GAACATTCGG AATGATTGGG
GGCTACTTTG CGGACATCGT GTTGAACTGG AATATTTTGT GCTCTAGGGA CCATGACGAA
GACGTATTGA ACTGGCGCAA AAACATTGCC GCAATAGCCC GTTTGGCTAT CGGAATCATT
GCTCTCTTGG TGCTGGGTGT TACCCCGTTT ATTGACAATT TTACCCATTT GGGTGCACTG
TGCTACGGTC TACTGTGTGG CTTGTTTGCC ATCGAGCCAG TTCCCTTGGA GGGATCCATT
GTTAGACTTC CATCTCGAAA AATGAGCGAC TTGCTATTTC GCCAGATTGG TGCTATAGTG
AGCGTCTTTT TGCTGGTGAT TACGTCGGTA GTCTTGAATT CTATGAATGT TGACGACAGT
CCTTGTCATG GCTGTCAATA CCTTTCGTGT GTACCATTTC CGTGGTGGAC GGAGGCAGAC
GAGCGTTGGT GGAGCTGCGA CGACTGTCCC TTCGTCACAG CGAAAGTACA CAATACCAAC
GGGGACTTAT TCTACGATCG TATGGATTTG GTATGTCCCA ACGATGTGGT TGAACAAATT
GATATTACGG GGAAGAATCT AACCAGCGGA GACGAGATCA GCAAGCTATT GCCTTCCTAC
TGCCGGGCTC GTTGTGAAGA CAAGTTCCAG TATTGA
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| Protein sequence | MAANSLTPWT DLILSNSENF SCQRQFPRSA PDHENVDNEQ STEPWPNPAT DHIAEGHGDD
KVNSQPFHED SMSRDLMAEP ITTGAGFKKA FWKSSRFNTS SNSVSDQNKG VANTDSLEEK
TQDSFPQNDF DASFSDLADT HDYIYPLEDS LAEQPNTGFA FRAEKSKQKL VDGEEHGWTI
AGAQSSSATT RSAAEWVEST SHTSDFESHI LTEEVHQAQQ KRTNRTWFTH AIALVFTTMM
LVELGLSGWR FAPLNINPLI GPSSEQLIDL GARQTSLILE EGQWFRIVTP IFLHAGIVHY
LTNMLAFWFI GGAIEEAHGI ATAIVLFFIP GVGGNILGAT FLPQYISVGA SGGTFGMIGG
YFADIVLNWN ILCSRDHDED VLNWRKNIAA IARLAIGIIA LLVLGVTPFI DNFTHLGALC
YGLLCGLFAI EPVPLEGSIV RLPSRKMSDL LFRQIGAIVS VFLLVITSVV LNSMNVDDSP
CHGCQYLSCV PFPWWTEADE RWWSCDDCPF VTAKVHNTNG DLFYDRMDLV CPNDVVEQID
ITGKNLTSGD EISKLLPSYC RARCEDKFQY
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