Gene PHATRDRAFT_31535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_31535 
Symbol 
ID7196076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp307597 
End bp308418 
Gene Length822 bp 
Protein Length273 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177065 
Protein GI219110627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000680275 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCCC ATAACGTGTT TACTTCGCTT CAGGAATTGA CAACGCTGGT GTCACAGCAG 
CAGAAAATTC TCAGTGGCTT GATTGATACC TACTGTAGAA TGTCTGGGAT GGCTGGGCCC
CTTGAACAAG AACAGATTGA TGCTATCATT TCAAAAGAGC CAGCTGAGGG AAACGGAAGC
TATGTTATCA CTCACAATCA GGTTCGGTCG TGCCTTGATG GGCTCGGCAT GTGGATGATC
AAAACAGTCG AAGAATTGGC GTCTGATGAG GAGAAACTTT CTTGTTTGCT GGCCAGCATT
GGTAATTTAT TTGTGGTTGC AGCAAATGGC ATTGCCAACA TTGCAATTGT ACGCAGTGGA
AACAAATCAC AGGCTGCAGA ACTACCGCCG GTGCTCCCAT ACGAGCTTGC TGCAAGCAAC
ATGCGAGATT TTGTCAAGAC AATTCAGAAG CACCGAACAC GATTACAGCG GAAATTTTCA
GACGAAGAAA TTGACCAACT TAGTCAAGAG TTTAGCATAT TTCTCCGAGC GTACCGAGAA
GAACCCTTGT TCCAAGACGC TTTATTGCAT TCTTATAATC AGAAGAGTAA TTTCTCAGAG
AGTCGGGCGG CAACTCATGG ACAATTTCCG CTCGTTCAGA AATTTTGCGG CGGGTTGGCA
TCGGCATTTC CAAATACAGC GACAGTTGAG TCTGACTTTT CCGTCATTAA TTGGGAGAAA
GACAACACAA GGCAACATCA TACAGACTTC TCGCTCGAAG GCATTTTGCA TTGTAAACAA
TACAACAATC TGAAGGACCT CTCGGCTCTA ATTAAGGAGT AA
 
Protein sequence
MEAHNVFTSL QELTTLVSQQ QKILSGLIDT YCRMSGMAGP LEQEQIDAII SKEPAEGNGS 
YVITHNQVRS CLDGLGMWMI KTVEELASDE EKLSCLLASI GNLFVVAANG IANIAIVRSG
NKSQAAELPP VLPYELAASN MRDFVKTIQK HRTRLQRKFS DEEIDQLSQE FSIFLRAYRE
EPLFQDALLH SYNQKSNFSE SRAATHGQFP LVQKFCGGLA SAFPNTATVE SDFSVINWEK
DNTRQHHTDF SLEGILHCKQ YNNLKDLSAL IKE