| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_25 |
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| Symbol | |
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| ID | 7196786 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1642575 |
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| End bp | 1647921 |
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| Gene Length | 5347 bp |
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| Protein Length | 1589 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177337 |
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| Protein GI | 219111171 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCGCAAATAC CTTGAAGTTC ATCTGTGAAA CACCATGTTT GCCCGTGCTG TCTTACGTTT
ATCGACCCGC GTTCGTGCTG TCCCACACGC CCGCCGAAAT ATTGCTGTAA GTACATTTGC
TGAAAGGTCC ATCCTCTGGA CCTCTACAGG GTTTTTTGCT TTGCGTGGAT TACATCCATC
TAACTCAACG AATTTTAGAC AGTCGCCGCT CGCAATACAA GCCCCTGTCT CGCTGCTGGG
TTCGCTGCGG GGGTCGCATG TTTGGGATCT GCCGGTGCAT TTTCACGCAT ACAGTGCGAG
GCCCTCCCCG TGTATGGCAG GCCTGGTACC AACCAGGAGC GCACATTCTT GGCCGTCAAA
CCTGACGGTG TCCAGCGCGG ACTCATTGGG GATATCATTG TTCGTTTCGA AAAGCGTGGC
TACAAACTTG TCGGCTTGAA GATGGTTTGG CCTACCGAGG AAATGGCCGC GGAGCATTAT
GCCGATTTAA GCAAGAAGCC TTTCTTCAGT GGCCTAGTCA AGTTCTTCAG CTCTGGCCCC
ATTGTTTGCA TGTGCTGGGA GGGAAAAGAC ATTATCAAGC AAGGGCGTCA AATGCTTGGA
GAAACTCAGC CTTTGGCGTC CAAACCTGGA AGTATTCGTG GCGATTTTTC GATTGACCTC
GGTCGTAACA TTTGCCATGG TAGCGACTCT CCCGATAGCG CCGAGCATGA ATTGAAAATG
TGGTTTCCTG AAGGTGTGAA CGATTGGGGA AAGGCAGTCG ATGCCTCCGT GTATGAGTAA
AACAATCCGT TTAAAGGCTA GGTTGGTCAA TCGTTGCGTA GTATTAAGAC TGGTCGTTTT
ACTCT
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| Protein sequence | LPHGTIYEST DRMEKVIIPP ADRNEANLHP RLRIHEVLET DPAKAFEGTV SLNPMQSSVF
EVAYLHRDNL LVCAPTGAGK TNVAMLSVVA HFRDVGLIAS DRTTVLETGR KVIYIAPMKA
LAQEVVEKFS AKLKGLRLTV RELTGDMQLT RLQAEAAHVI VTTPEKWDVV TRKSGTDENA
LGNQCGLLII DEVHLLADER GAVIESVVSR LHRLVESRQK QARIVGLSAT LPNYQDVASF
LKVPERGLFF FGPEHRPVPL QQQFIGVSAG TKDRFAKEKR MNEICFDVVL DSLQRGYQVM
VFVHSRKGTG DTAKSLAEMA SHEGVLERYF VTAGKEGSSG DAYSRHAEKV KKSRNREVGM
HFANGMGIHH AGMLRGDRKL TEQVFSDGAI KVLVCTATLA WQVFRGFRLP AHTVVIKGTE
VYNPEKGGVV DLSILDVQQI FGRAGRPQFD TSGEATMITS IDAFPRYMDK LVRAVPIESN
FIKHLADHLN AEVVGGTVTN IQEAVTWLTY TYLYTRMRRN PIGYGIKEDE KNSDPMLKGR
CNELVREAAK LLDLNRMIRY DQQSGNLSVA DRGRVAAHFY IQSESIATFN EMLAMTDYYT
DADLCRVICN ATEFRNLKIR QEEMSELEEL VKTACPLPLK GAGMDDRGRG LITDASDKAF
VLLQAYISRA KIKSFTLITD MNYIASNASR VARAVFEICL KQNSAGPALK LLRIAKSADT
RIWWFQTPMR IFEDEFSESV YSSIETKSGG KGYDSLYSAL SLLDMQPKEV EIYCRWNKSN
KGGRGGEKIQ RFVRTLPNLH IECDVQPVTS SVMRFHILVT PNFEWNGRWH GGAQSFWLWV
EDGENNRIYH DESILFAKRT FPDAITLDLS IPAFEPMPSQ YFIRAISDSW VGSEMLLPVS
LDHVQMVKDK TPITPVYDLS PVPVTSLAEC KYEQLYRNFK CFNSIQSQLF HVLYHTDSPV
LLGAPTGSGK TIVAELALLR MKRIFPKGIC VYIAPLKSLA RERLKEWKIR LGSAPLRWKI
LELSGDTHHD QGVVESADVL VCTPEKWDLI SRGWRSYVKA EASENAGKAF VKRVKLLVLD
EVHLLGEERG AVLEAIVSRT RFISQFVEEQ NNAKTSKPKE DVTRIIGLST ALANPLDLAD
WIGIDTRNTG PTRMRGLYNF SSSVRPVPLT VHVQGYPGRH YCPRMATMNK PCFAAIKEYS
PAKPVLIFVA SRRQTRLTAF DIISYAAAEA NPKRFLKCNE EVVDAIINTV SDEALRHTLA
FGIGLHHAGI SSHDRDVVET MYLSGKIQVL VATSTLAWGV NTPAHLVIVK GTEYFDGKSS
RYVDYPLTDV LQMIGRAGRP GFDDRGSAVV MSTEDKKPFY KKFLYSPFPV ESCLTGRIHE
NLNAEIASGT IGSVLEAVGY LTWTFYARRV RANPSFYGAQ SSSEEDVEHL LVSIVKSTLR
DLEDQGCVSI QSDELEAHVT TMPLGLATSN FYLLYRTPKQ MQFVDEISLA WILYALASTH
EFDELPVRHN EDILNEELSA NVRWGPDVDH LLSGDQSNAY RNPEIFSDPH TKCFLLLQAH
LEHAKLPISD YVNDTKSVVE NIPRLLAAM
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