| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24978 |
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| Symbol | |
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| ID | 7196742 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 2110062 |
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| End bp | 2112066 |
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| Gene Length | 2005 bp |
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| Protein Length | 506 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176912 |
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| Protein GI | 219110321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTCGTCGTT TAAGACCCAC AACACGCCGG AACGCGGATA CTCTAAACCA TAGTTCTAAA
GATCCAGAAC AACAATGAGC GCCGCCCATA CCGAACGCTT CATTCCTGAG CGTCAAAAGC
TCGACCAACT TTCCATCGTC AAGGACTATG CCACTGTTCC GCGCCTTGAG TACCGGTGAG
TGATTCTGGT CGATATTTGG CGTGTGGGCG AAGAAAAAAG ATCTTCCCTT TTACCGGTTT
TGGGATTAGA ATGATCCGGC GGGCTCTCGT CTTTCATCTG TGGCAATCTG CTGCTTAGTA
TTATGTTGTA TTCGAAATCG ATAGCTGGCG TAGTTTCGTT TGGGCTTTTA TTGCTCCCTG
GATTTCCATG CTGGCCATGG TTCCGTCGAC GGACGCAGCA CATAAATTCA TTCTAGTTCC
CGGATATGCA GATCAGTTTG CCCTATGTAC TCTGGTAGAG CGACATGTCC TCCTATTACG
GTTTGTGTTT TATGTCGTCG CGACACTGAT ATCTGATCAC ACATATTCAA CATTTTTTAT
TCAGAACCAT CGCTGGCGTG AATGGTCCTT TGGTTATCTT GGACAATGTC AAGCTTCCTA
AGTATGCCGA GATTGTTAAC TTGACGCTAG GTGATGGTAC CCAGCGATCT GGCCAGGTTT
TGGAAGTGTC GGGGAGCCGC GCCGTCGTTC AGGTGTTCGA GGGCACTGCC GGAATCGACA
ACAGGAAGAC CCGATGCGAA TTCACCGGTG ATGTATTGAA AATGGGTGTT TCCGAAGAGA
TGCTTGGGCG CTCTTTTAAT GGGTCCGGAA AAGTCATTGA TTCTGCCCCC AAAGTCCTTG
CTGAGGCCTA TCTTGATATC AACGGCCAGC CGATTAATCC ATCGTCACGT GATTACCCAA
AGGCCATGAT TCAGACTGGT ATTTCCGCTA TTGATGTCAT GAACTCGATT GCTCGCGGCC
AAAAGATCCC TATCTTCTCC GCTGCTGGGC TGCCACACAA CGAGGTCGCT GCCCAGATCG
CTCGTCAAGC CTCTCTGGTA AAGCAAAAAG ACACCATGGA TGGACACGAA GACAATTTTG
CTATTGTCTT TGGTGCCATG GGTGTAAACA TGGAAACCGC CCGTTTCTTT CGTTCTGATT
TTGAAGAATC TGGTGCAATG CAGCGTACTG CTCTTTTCTT GAATCTTGCC AACGATCCCA
CGATCGAGCG TATCATTACT CCCCGTCTAG CCCTTACCAC TGCGGAGTAC CTCGCGTACG
AACGCGATTT GCATGTTTTG GTCATTCTTA CCGATATGTC TTCGTACGCC GATGCCCTTC
GTGAGGTTTC TGCCGCCCGT GAAGAAGTCC CTGGACGCCG TGGTTACCCT GGTTACATGT
ACACGGATCT TTCCACTATT TACGAACGTG CAGGTCGTGT CGTTGGACGC AACGGTTCTA
TTACCCAGCT TCCCATTCTT ACGATGCCAA ATGACGATAT CACGCATCCC ATTCCTGACC
TTACTGGATA CATTACCGAA GGGCAAATCT ACCTCGATCG CCAGCTCCAC ACCAAAGGAA
TTTTCCCCCC TATCAACGTC CTTCCATCGC TGTCGCGTCT GATGAAGTCG GCTATCGGGG
AGGGTATGAC TCGATCAGAT CACGGTTCTG TGTCTAATCA GCTTTATGCC TCTTATGCCA
TGGGTAAGGA CGTCATGGCC ATGAAAGCCG TTGTCGGAGA AGAAGCCTTG TCGATGGAAG
ATCACCTTTA CCTCAGTTTC TTGGAGCGCT TTGAAGGCAA ATTCGTGTCT CAAGGTCCTT
ACCAGGCCCG TTCCATTTTT GAGTCATTAG ACCTTGCCTG GAGCATTCTC CGTGCTTTCC
CGAAGGAATT GCTCAAAAAA ATTCCCAAGA AAACTTTGGA TCAATTCTAC GCCCGCCGTC
GCGAGGCCGC AGAGGACATG AACAAGGCAG ACGGTTCCGC TTAGAAGATT GTAATCCACA
TTAGTAAGCG AAGAAAGGAA AATCT
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| Protein sequence | MSAAHTERFI PERQKLDQLS IVKDYATVPR LEYRTIAGVN GPLVILDNVK LPKYAEIVNL
TLGDGTQRSG QVLEVSGSRA VVQVFEGTAG IDNRKTRCEF TGDVLKMGVS EEMLGRSFNG
SGKVIDSAPK VLAEAYLDIN GQPINPSSRD YPKAMIQTGI SAIDVMNSIA RGQKIPIFSA
AGLPHNEVAA QIARQASLVK QKDTMDGHED NFAIVFGAMG VNMETARFFR SDFEESGAMQ
RTALFLNLAN DPTIERIITP RLALTTAEYL AYERDLHVLV ILTDMSSYAD ALREVSAARE
EVPGRRGYPG YMYTDLSTIY ERAGRVVGRN GSITQLPILT MPNDDITHPI PDLTGYITEG
QIYLDRQLHT KGIFPPINVL PSLSRLMKSA IGEGMTRSDH GSVSNQLYAS YAMGKDVMAM
KAVVGEEALS MEDHLYLSFL ERFEGKFVSQ GPYQARSIFE SLDLAWSILR AFPKELLKKI
PKKTLDQFYA RRREAAEDMN KADGSA
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