| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24935 |
|---|
| Symbol | |
|---|
| ID | 7196712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 1963020 |
|---|
| End bp | 1964537 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | helicase_1 |
|---|
| Protein accession | XP_002177412 |
|---|
| Protein GI | 219111321 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATCCGAAAAC AGGAGCCCTT CCTTGCTAGC CTTCTGTGTC TCTCTTCCTT GTCTTCTGGA
GACATCATAT TTTTTCATTC CCCCCTTGAA ATTAGTAAAG ACGGAAGAAT CGAAGTAATT
TAGTGTCCTT TGCCTGAAGA GCACTGATAT ACGATGAACT CTGCGAGCAC ACGGCAACTG
CAGAATCTGA GACGCTTCTT GGCTCGGCCA TCATCCTGTC GGAAGCGACA GCACAATACC
GCCGTTGCAT ATGTTCCAAA GAGGGTGAAA AATCAGAGCA TTCATGATTC ACTTTCAAGG
GAGAGTGCAG CCGTGACATC CTGCAGACGG CTGCATGCGC CGGGAAGCAC CGATCACAAC
CCAGGTGAAT CCGCGACCCA ACCGGATGAA TTGCCGAACT TTGATGATCT GGTTGATCTG
GACCCTATAC TCAAAAGCAT TCTAAAAGAA AACGGACTGC AACGAATGAC TGAAATCCAG
GCCAAAACAT GGGATGCTTC GGTAGGTGGA AATGATGTTA TTGGTCGCGC GAGAACAGGG
ACCGGGAAAA CACTCGCATT CTTGCTCCCG TCCATGGAGA GGCTACTACG CAACAAACAT
TCCGGGAACC AGATCCGAGC CTTAATCATC TCCCCGACGC GCGAACTCGC TCGTCAAATC
GGTGAACAGG CCCAAATGCT GGTGCATGGA TATAAAAGAA CACATTCTAG CCAAGTCATG
TACGGTGGAG CTTCCAGGGA GCGGGATGTC CGAGATTTGG AACGTAGAAT TCCTTCAATT
TTGACTGCGA CTCCGGGTCG TCTTATCGAT CATTTGAACT CTACACAAGT AAAATCGAAG
CCCTTTGGAA ATTACCTTTC GGATGTTGAC GTGCTTGTCC TAGATGAAAT GGACCGGCTA
CTCGGTATGG GATTCTGCGA CGACATTGTA GAGATTCTTC AATACTTGCC TCAGAATCGA
CAAACTCTGC TATTCTCAGC TACATCTCCA CCGGAAGTTC GACGCATGAT TGACCAATGC
GTTAAACCGA ATCATACAGT TGTGGATTGT ATGCAAGAAG GCGATCCTTC TACGTATACG
AATACAATAG TGGGTCAAAG ACACGTCGTT TTACCGCCAG ATCGGATTGT GTCGGGAGTT
TTGCAAATAG TTCAGCTCCT GATGATGGAT CCGGATTACA AAATTCTTGT TTTCTTTCCA
ACGACAGCAC AAGTCACTTA TTATTCCCAG CTTTTCAATC GCGGCATCGG GCTCCCAGTT
TTAAGTATTC ATTCCAAAAT GAGCCAGTCA CTACGAACGA ACAACAGCGA TCGATTTCGA
TTTGCTAGCC GTGCTGTTTT GTTCACCAGC GATATCAGTG CCCGTGGTGT GGACTATCCC
GATGTGACAC ATGTGATCCA AGTTGGGGCA GCTAGTGATA GCGAAACCTA CATTCATCGC
TTGGGTCGAA CCGGCCGCGC TGGTAAGAAA GGACAAGGTC TTTTGATTTT GACGAGTGAC
GAGATCGACT TTTTGAAC
|
|---|
| Protein sequence | MNSASTRQLQ NLRRFLARPS SCRKRQHNTA VAYVPKRVKN QSIHDSLSRE SAAVTSCRRL
HAPGSTDHNP GESATQPDEL PNFDDLVDLD PILKSILKEN GLQRMTEIQA KTWDASVGGN
DVIGRARTGT GKTLAFLLPS MERLLRNKHS GNQIRALIIS PTRELARQIG EQAQMLVHGY
KRTHSSQVMY GGASRERDVR DLERRIPSIL TATPGRLIDH LNSTQVKSKP FGNYLSDVDV
LVLDEMDRLL GMGFCDDIVE ILQYLPQNRQ TLLFSATSPP EVRRMIDQCV KPNHTVVDCM
QEGDPSTYTN TIVGQRHVVL PPDRIVSGVL QIVQLLMMDP DYKILVFFPT TAQVTYYSQL
FNRGIGLPVL SIHSKMSQSL RTNNSDRFRF ASRAVLFTSD ISARGVDYPD VTHVIQVGAA
SDSETYIHRL GRTGRAGKKG QGLLILTSDE IDFLN
|
|---|
| |