| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24838 |
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| Symbol | TOP6A |
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| ID | 7196214 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1699981 |
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| End bp | 1701563 |
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| Gene Length | 1583 bp |
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| Protein Length | 430 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | type II DNA topoisomerase VI subunit |
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| Protein accession | XP_002177352 |
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| Protein GI | 219111201 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTTG CGTTGGCGTT ACGGCAAGAC TTGCACCTAG CCCCGCCAGA TCTGCGTTCT
AGACAGATCT ACGCATCCAC TGCACCATGG CGTCTCGCAA CCGGAGAGAA CCATTAGCGT
CTGGACCAGC GCCTCGTCCG GACATGTCTG CAACCTCGAC CCGGAAACGC AAAGCCGTTG
CACTGGCCGC GGATGCCGAT CTTGTTCTGC GCAAATGTCG ACAACTACGC CAGTCGTTAG
AAGCCAAAGC AGAAATAGAG TCCTCTGTAG TTGGAGTACT TCCGGAAGGA ATCCCATCCG
ATATTGTCGA AGTCGTTGAA TTACCGGCCA CTCAGGTTTT GGAAGGAATG GAAGCCATGG
CATTGCATAT TGCGCAGCAA GTTTTGGAGA GGAAAGGTTT TTCCTTGGAA ATTCCAAGCC
GCGCCGCATC CAATCAGATA TACGTCAAGG AGTGGGACCG TATTGTATTG GGAGGCAAGC
GCTCTAGTCG AAGTTTCTTG AACGTAAAGG AATCTCGCAA ATCGGCAATT ACCCTTCGGG
TGATGCAGTT GCTCCACGCG GTCCTTATGA AGCGCATTCA CATCACCAAG CGTGACTTGT
TCTACACGGA TGTCAAGCTT TTTGTAGATC AAGCAGAGTC GGACGGTGTC TTGGACGATG
TGGCGACAAT GATTGGATGC ACGCGCAGCA ACTTGCATGT CGTTGCTTCG GACAAGGGGT
TGGTCGTGGG GAGAATTCAA TTCGAAGAAG ATGGCGATTT TATTGACTGC ACCAAAATGG
GTGTTGGAGG TAAAGCAATT CCGCCATATA TCGACAAGAT CGAAAATATT GCTAGCGATG
CCGAGTTTAT TTTGCTGGTC GAGAAGGAAG CAGCTTATAT GCGCATGGCG GTACGTTTTG
GTGAAGCCAT AGGTTTCATT TCTCACTCAA TTATTGCTTC TCACAGTATC TGGCTTCACT
CTCAGGAAGA CCGTTTCTAT CACAGGTACC CATGCATCAT TATCACAGCA AAAGGCCAAC
CAGATGTCGC CACCCGCATG TTCTTGGCAC GCATCACCTC GGAACTTAAA ATTCCGGTCC
TTGGGCTGGT GGATAGCGAT CCGTATGGGC TCAAGATTTT GTCGGTCTAC ATGTCGGGGA
GTAAGAATAT GAGCTACGAC AGTGCAAGTT TGACAACGCC TGACATTAAA TGGCTGGGAT
TGCGACCGTC TGATCTCGAC AAGTACGATT TGCCAGAGCA GTGTCGGTTG GATATGACGG
AGAACGATAT CAAGACTGGT AAGGAAATGA TGAAAGAAGA CTTCATTCAG AAAAATCCAG
AGTGGATGAA AGAACTGGAA ATTATGGTGC GTCAAAGGAG ACTCGGACAG GGCTATTAGT
GCGTGCATCT TACCGCTTTC TTTTCATACC AATAGGTCAA GACAAAGAAA AAGGCCGAAA
TCCAGGCTTT GTCTTCCTTC GGCTTTCAGT ATGTGACGGA ACAATATTTA CCTCGGAAAC
TCAAGGAAGG AGATTGGATC TAGCCAGCGG GATAGCAAGA GCACATGCTG CTTACATAAA
TTAAATCGCT TTATCTTCCT TCG
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| Protein sequence | MASRNRREPL ASGPAPRPDM SATSTRKRKA VALAADADLV LRKCRQLRQS LEAKAEIESS
VVGVLPEGIP SDIVEVVELP ATQVLEGMEA MALHIAQQVL ERKGFSLEIP SRAASNQIYV
KEWDRIVLGG KRSSRSFLNV KESRKSAITL RVMQLLHAVL MKRIHITKRD LFYTDVKLFV
DQAESDGVLD DVATMIGCTR SNLHVVASDK GLVVGRIQFE EDGDFIDCTK MGVGGKAIPP
YIDKIENIAS DAEFILLVEK EAAYMRMAED RFYHRYPCII ITAKGQPDVA TRMFLARITS
ELKIPVLGLV DSDPYGLKIL SVYMSGSKNM SYDSASLTTP DIKWLGLRPS DLDKYDLPEQ
CRLDMTENDI KTGKEMMKED FIQKNPEWMK ELEIMVKTKK KAEIQALSSF GFQYVTEQYL
PRKLKEGDWI
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