| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24792 |
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| Symbol | |
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| ID | 7196770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1569174 |
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| End bp | 1571134 |
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| Gene Length | 1961 bp |
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| Protein Length | 513 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177321 |
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| Protein GI | 219111139 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.379342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCATGACATC TCCTTAGCCC CATCATCTCC ATCCATCGGC ATGCAAGTGG ACTAACCAAC
CCAAAGGGGA AGTTAAAGAA CAAAGCAGAA CGACGGTCAT GAAAGCAGAG CCGCTTTCTG
TTTGTGTGGT ACTTCTATTT CTGACTGTGA ATCCAATGGT CTTTACTTTG GCGTTCCCTC
ACAGTTGCCG ACCAGCAACA TGGACCAAGT CCGTGTGGAA CGTTCTTCGT CCGCAGTTCC
TGGGTGTTGA GAGAAGATCT TGCCGATGGA TGAGCCAGAA AGACAACGCA TCACCGTCGA
CGGGTCCAGA CATGGACGGT GCCCAAATCG AAGAAAGGGA GCAACTGCCA ACATCACCGT
TGTCGTCCAC TTCGTCCAAG CGCAAACGAC CGATCGAATA TCCCCCACCG CCGGCACCGT
CCGAGTTTCC CGACTGGGCT TACGAAGCGC GCGACTTCTT TCGTTTCGAA ATCCTGCACG
AGTCTTCTAA AAGTGGTGCC CGAGTCGGTC GCATACACAC ACCGCACGGG ACGATTGACA
CACCGGGATT TGTCGCTGTT GCGACCAACG CGGCACTCAA GGGTGTCGAT TTTCGTGACG
CCGACAATGC GGGACAACAG CTCATTTTTT CCAATACCTA TCACCTCTTG CTACATCCCG
GACCCGACAT TATTGAACAA GCTGGAGGTA TACACAAATA TACCAGGCGC AATGGACCCT
TCATCACCGA CTCGGGCGGC TTTCAGGTGT TTTCGTTGGC TTACGGGTCG GTCTACGAAG
AGCTTTCGTC CAAAGGCGAA CTGAAGCGGG CGAGCGTAAA AAAAGATCGC GACGGCTCAC
GAGCAGATGT CATGGGAAAA GACGCAGTCA AGGTAACCGA AGACGGCGCC ATTTTTCGGA
GTTATAGGGA CGGCACGAAG TTCTTACTGA CTCCCGAAAC AACTGTGCAA GCACAAAAGA
AGATTGGCGC CGATATAATT ATTCCCCTGG ACGAGTTACC AGGTTACTAC ACTGATCGCC
AACGTTTGGT TGAGTCGGTG GCGCGAACAC ATCGATGGGA GGCTCGCAGC TTACGAGAGC
ATTTGAAAGA CACCAAAGAA CAGGCTATGT ATTGTGTGGT GCACGGAGGA GTCGACTACG
AATTAAGGAA ACAGAGTGTA GACTATCTCA CGTCACTACC CTTTGATGGG TATGGCATTG
GTGGCTCATT GGGAGACGGT CGGGAGGAAC TCAAGGACCT ATTGACGTGG CTCATGCCAA
TGTTTGAAGA AGGGGACCGC AAGTTCAAGC CACGGCATTT GCTAGGTATC GCGGACGAAG
AGAGCATCCG CAATGCTGTT CCCCTTGGAA TTGATACATT GGACTCATGC TATCCAACAC
GCCTCGGTCG TCACGGTACT GTGTTGACGA GGGGCGGAAC AATACGTCTT CAGAGCGGGA
AACATGCGCA ATCATTTGGT GTACCAATTG ATTCCGAATG CCAATGCTCG ACGTGTCAGC
ACTACGATCG TGCCTACCTT TGGCACTTGT TTAAGGCAAG CGAACCGATT GCTATATCGT
TAGCGTCCAT ACACAATATT CAATATATGA GTGATCTTAT GGCACAAATT CGCGAAGACA
TTATGAACGA TTTGATCTAG TCGATTGTTT ATGCTAATAA TTGAACAGTT ATATACAGCT
GATTGTTTGG TTACCAGACT ATAAACGAGC TAAATTTGAA GAACGAGGAA GGCTGCGTGA
CGCGCGTCTG GATTTCAAAG CGCCCGTCGG CGTTAGGAGG GAATCGATGA CCGTCTTCGT
GTCTTAGGAA ATTACAACTC TGCCATTGTG TCATATTGCT AACAGCCAGC CCATTCACTT
GGATCTCTGA TAGCGCTTTC CAGTTGTCCG GTTGCACCAT GCCTTTTGGG CAACGTCCCC
AACTACACGC TGCGAAGCAA ATTGCCAAGA AACCTTTAAG G
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| Protein sequence | MKAEPLSVCV VLLFLTVNPM VFTLAFPHSC RPATWTKSVW NVLRPQFLGV ERRSCRWMSQ
KDNASPSTGP DMDGAQIEER EQLPTSPLSS TSSKRKRPIE YPPPPAPSEF PDWAYEARDF
FRFEILHESS KSGARVGRIH TPHGTIDTPG FVAVATNAAL KGVDFRDADN AGQQLIFSNT
YHLLLHPGPD IIEQAGGIHK YTRRNGPFIT DSGGFQVFSL AYGSVYEELS SKGELKRASV
KKDRDGSRAD VMGKDAVKVT EDGAIFRSYR DGTKFLLTPE TTVQAQKKIG ADIIIPLDEL
PGYYTDRQRL VESVARTHRW EARSLREHLK DTKEQAMYCV VHGGVDYELR KQSVDYLTSL
PFDGYGIGGS LGDGREELKD LLTWLMPMFE EGDRKFKPRH LLGIADEESI RNAVPLGIDT
LDSCYPTRLG RHGTVLTRGG TIRLQSGKHA QSFGVPIDSE CQCSTCQHYD RAYLWHLFKA
SEPIAISLAS IHNIQYMSDL MAQIREDIMN DLI
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