| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24692 |
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| Symbol | RPN3 |
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| ID | 7196430 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1257295 |
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| End bp | 1259077 |
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| Gene Length | 1783 bp |
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| Protein Length | 516 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | regulatory proteasome non-atpase subunit 3 |
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| Protein accession | XP_002177250 |
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| Protein GI | 219110997 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCCTCGTTTT GGTCAATGAG TTCTTTCCGT GAAGGATAAC TTTCGTATTT GTCTTACTCA
AAGTCGCTGA CAGTGAACCG TAACAATTGA TCGATACGCA CTCTAAGCAG CAGCGTTGCC
AATCCTTAGA TCAATCAAAT TGTCAAATCA AGGAAAATGG TCGAAGATAC CCCGATGGCG
GAGGAGGATT CCTTGGCAAA GCCAGAAAAT CAAGATAAAG TAGAAACCGC CCCAAGTGTT
CCGCCACTCG AAGCTTCGGC CCGTCGTTTG GAACGCCTCT TAGGAGGAGG TGCCGCGGAT
AAGGGCCAAC AGCTGCGCGC TTACACAAAC CCGACCAAGG TCATTCGGCG ATGGTTGGGA
ACATCATCGG GGTCCGCCGC AGACGCAACC GCCGAAGATA TTAAAGCAGC CGCTGCCAAA
CTGTTGGACC CTGCAGGAGC CTGTGCTTCC GGGCGTGAAC TTTTGGTTTC CGGCGGTGAA
GAAGGGGGCG AGAAAAAGGA TTCCTACTTA TCCGCAGCTT CTGCGAGAGA AGTCGAAGCT
TGGTTGATCT CGGTGGCGGT CCGACATTTG TGGAAAGGCC ACAAATTCCA GGAAGCTTTT
GATTTAGCTC AAAAGGGAAT CGAGATCATT ATGGCCCACA TCGACCAAGC TTCAATTCAT
ATTACCTCCC TCTCAGCGGG ATCCACATCG TCGCTCTTTC CTTTATTGTC GCGGATGTTC
CGCTTGCGCT CACTCATGGC AGAGGCTCTC AATGATTCCA ACTTGACTGC CTTGCTACGT
GCGGATATGT CCAAGGCTCA CAACATGGCT GCCCTCCGTC GCGATGTTGA TACTCAAGCA
ACGATTTTGA ATAGTATGCT ACGCGACTTG TTGCGTAGCT CGCAAGGTAA GCTTCCACCA
TTACAAAATC TAGGATTTGT TCCCAACCAG TCAACTAACA AATTGGCTCT TTCCTTGCGT
TGTAGTGGAG CAAGCCGAAA AGCTATTAGC CAACTCTACA TTTCCTGAGA CGGCGTCGAA
CAATCAGCTG TGCCGTTATC TGTACTATAG TGCCAGGATC CAAGCGCTGC GTCTTGATTA
CACAGCGTCA TTTTCCGGAT TGAGTCAATG CCTTCGCAAG GCTCCCACCA ACACTGGGGT
CGGGTTCCGG ATCGCGGCCC AGCGATTGTT GGTTGTCGTG CAGATGTTGA TGGGTGATAT
CCCCGAGCGT CACGTCTTCT TTACCAAGGG TATGAAGGCT GAGCTGTTGC CCTACTTGCA
CATTACGCAG GCGGTTCGTC GGGGAGATTT GGCAGTCTTT ACAGAGGTTG TTTCCAAGTA
CGCAACTCGT CTCCAACAAG ACGGTACTTA CACCCTCATT TCGCGTTTGG CCCACCAAGT
CGTCAAAGCA GGTCTCCGAA ATCTGAACGT GAGTTACAGT CGGTTGAGCT TGGAGGACGT
GGCTCACCGT TTAGGCCTCC CCAGTGCTAC ATCGGCTGAA TTCGTGGTAG CCAAGGCTGT
CCGCGATGGT GTGCTAGACG CCACTATTCA CCACGAGGAA GGATACGTAC AAAGTCACGA
CCTGGTGGAC GTTTACGCAA CGAAAGAACC GGCACTAGCG TTTCATCGAC GCATCGCCTA
CTGCTTGACA ACCCACAATG ATGCTGTTCG GGGAATGCGC TATCCGCCGG ATGCTTACAA
AAAGCAGTTA GAGGCGAGCC GTGGAAATCG GCGAAAGCGG AATGACGACA AGACAGATGA
GGAGAAAGCG CAAGAACTTG AAGAAGAGTA CGACGAAGAC TAC
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| Protein sequence | MVEDTPMAEE DSLAKPENQD KVETAPSVPP LEASARRLER LLGGGAADKG QQLRAYTNPT
KVIRRWLGTS SGSAADATAE DIKAAAAKLL DPAGACASGR ELLVSGGEEG GEKKDSYLSA
ASAREVEAWL ISVAVRHLWK GHKFQEAFDL AQKGIEIIMA HIDQASIHIT SLSAGSTSSL
FPLLSRMFRL RSLMAEALND SNLTALLRAD MSKAHNMAAL RRDVDTQATI LNSMLRDLLR
SSQVEQAEKL LANSTFPETA SNNQLCRYLY YSARIQALRL DYTASFSGLS QCLRKAPTNT
GVGFRIAAQR LLVVVQMLMG DIPERHVFFT KGMKAELLPY LHITQAVRRG DLAVFTEVVS
KYATRLQQDG TYTLISRLAH QVVKAGLRNL NVSYSRLSLE DVAHRLGLPS ATSAEFVVAK
AVRDGVLDAT IHHEEGYVQS HDLVDVYATK EPALAFHRRI AYCLTTHNDA VRGMRYPPDA
YKKQLEASRG NRRKRNDDKT DEEKAQELEE EYDEDY
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