| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_17974 |
|---|
| Symbol | |
|---|
| ID | 7196969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 2458046 |
|---|
| End bp | 2459706 |
|---|
| Gene Length | 1661 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177522 |
|---|
| Protein GI | 219111541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0964806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGATCGCTTC ATCGTTCCAA GTGGATTGGT CAATCAGATA TAGCGACAGA GAGAGTCACG
GATGATAGAT TGGCTATCGC TGCTTCCATC ACCTTGCGTT TCGAAGCAAC AGTAAGGAAA
TGGCGGGACC GAGATCCGGT TCCGGCCGAA CCCGTAAATC CACGCTGGCA TCCCGACGGA
ACAATTCCCA ACCCCACACT ACGCACAAAA GAGCCCGCCC AACGCTCAAT CTTGCCGCAT
CCGTCGATGA ACACATTGAT TCTGACGAAG AGGAGCACTT CGAAGATCGC TTGGAAGGTC
GGGAGCCGTC CTTAGAAGAC GAACAATCCG AAGAAGAGGA AAATGTTGAA GCCAAACGAG
TTCGGATGGC ACGGGAATAT CTCGAACGCA TGGATCAACA GTCCGACAGT GACGACACTT
CCGATGATGA TGATAACGAC AACGATAGCG ACCAGGACGA TGTACAGGAT GATCGCGTGG
CCCGAAAACT GCAACGCGTG CGACTCAAGC GCGAAGGTAC CTTCGAACGC GCAATTGCGG
ACAAGCTCGC GACTCGCTTG TCTGCCCTCC AACCTCCATC CTACGATACC ACTACAGCAG
TAGTATCAGT AGCAGTAGGA ACAACAGCAA CAGTAGCGGC AATTACGACC CCGCGGCAGC
AAGCCCAGGC ATGGATTGCG GCGGGCCATC AAAGACTACT GCGGGGACAC GATCTGACCC
CCACTTGCGT CGCCCTTCAA TCGGACGGTG CCACCGCCAT TTCGGGATCC AAGGATCATT
CCGTCATTCT TTGGGATATC GAAACCGCTT CACGGAAAAC GCATTTATGC CCCGTGTGGA
AGAAAGAAAC CGCCGACAGC AGTAAACCAC GTACCGTTGG GGAAGTTTTG TCCGTCGCCT
GCTCGGACGA TGGTCGCTAC GCCGCCGTTG GATCCCGGGA CGCTACTGTC CGTGTTTTTG
ACATTCGTTG TCGCTCACAG GCACTTGTCC AAACCTTTAC CGGGCATAAA GGCGCCGTCA
CGTCCCTGGC CTTTCGGACT AATTCACTGC AGCTCTTCTC CGGAAGCGAC GATCGCTGTA
TACGACACTA CAATCTCTCG GAAATGCTCT ACATCGAAAC ACTCTACGGG CACCAGTTTG
GGGTCACCGA CTTGGATTGT CATCGGGATG AACGTCCCGT ATCGGTGGGT AAGGACCGGA
CCGCACGGGC TTGGAAACTG GCGGAAGACA CACATTTGAT CTTTCGGGGC GGCAGTAAGC
TACCCTCCGC TTCCAGCGTT ACGGTCGTGA AGGACGATTG GTTCGTGACT GGACACGAAG
ACGGACACCT GGCTATGTGG AAAACAGACA AGAAAAAGGC GGTGGCACAA ATTGCCAACG
CACACGGCGA CGACACGGAA ATTGTAGCGG TCCAAGCTTT GCCGGGCAGT GATCTGGTAG
CGTCGGGATC GTACGACGGA TACGTTCGTT TCTGGAAGGC ATCAACCGGA CGGACTTTGG
CGGAACGGGG TCTGCAGGCT GTGGGCGAGA TTCCGTTGTT CGGGTACGTG AACGATATTG
CCTTTGGTCC CAAGGCCCGC TTTTGTGTGG CTGCGGTGGG ACAGGAACAC CGTCTCGGTC
GTTGGAATCG AGTGGCCCAG GCCAAGAACC GCTTGGCTAT C
|
|---|
| Protein sequence | MAGPRSGSGR TRKSTLASRR NNSQPHTTHK RARPTLNLAA SVDEHIDSDE EEHFEDRLEG
REPSLEDEQS EEEENVEAKR VRMAREYLER MDQQSDSDDT SDDDDNDNDS DQDDVQDDRV
ARKLQRVRLK REVAAITTPR QQAQAWIAAG HQRLLRGHDL TPTCVALQSD GATAISGSKD
HSVILWDIET ASRKTHLCPV WKKETADSSK PRTVGEVLSV ACSDDGRYAA VGSRDATVRV
FDIRCRSQAL VQTFTGHKGA VTSLAFRTNS LQLFSGSDDR CIRHYNLSEM LYIETLYGHQ
FGVTDLDCHR DERPVSVGKD RTARAWKLAE DTHLIFRGGS KLPSASSVTV VKDDWFVTGH
EDGHLAMWKT DKKKAVAQIA NAHGDDTEIV AVQALPGSDL VASGSYDGYV RFWKASTGRT
LAERGLQAVG EIPLFGYVND IAFGPKARFC VAAVGQEHRL GRWNRVAQAK NRLAI
|
|---|
| |