Gene PHATRDRAFT_17846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17846 
Symbol 
ID7196740 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2102855 
End bp2103658 
Gene Length804 bp 
Protein Length145 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177446 
Protein GI219111389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGCCGTAGT AGAGGAGAAC ATAGACAACC ATGGCGATTA TCAGTGAGTG ACTGTTATGC 
ATCGTGCTGG CGCTTGTGGC GTATGAAGTC ACCGGTTGCG TATTGCGCTG ATAAAAATCA
GAGAGCTTGA CGAGTCAAAA TAATTGTTGG CTACGACTTG CTTGTGTTCC TGTTGTCTAG
AAAGTAGCTG ATGAGGCACC TTGAAACGAC GCAAATAGAA GTGCTTTGAG TTTTCGCTAA
GATGTGAAAG TCTTACATTT TGCACTTTTT GTATTCCAAC AGAGGCAGGA AAGGTTGTTA
TTGTCCTTGC CGGACGTCAC GCTGGTAAAA AGGCAGTCGT TGTCAAGACC TTTGACGATG
GCACTAGTGA CAAGAAGTTC TCGCATATTC TAATTGCGGG CCTGGCACGA AACCCTCGAA
TGGTTACGAA GGGAATGAGC AAAGCTAAGG TTGAAAAGCG AAGCAAACAA CTGAAGCCTT
TTGTCAAATA CATTAATGTA CGTCATGTTT TCCCAACACG TTACGTCGTC GACATGGATT
TGAAGAAAGC TGTCGACGAG GCTGATCTTG TTGATGCCGA GAGGAAGGTG GACGTCAAGA
AAGGTCTCAA GAAACTTTTT TACGACCGAT ACCTCAACCA GAAGGAGGTC ACCAGTGAAA
AGAAGTCACA AGGCAGTTCG TACTTTTTCC AGAAACTGCG ATTCTAAAAT AGATCATTGG
GTGTACTCCA AGCCTTAGGA ACTTCTTGCG CGTGCATGTT TCAATGCACA AGTTTAACCA
CATACTTGAA ATTTGCGTAC TAGG
 
Protein sequence
MAIIKAGKVV IVLAGRHAGK KAVVVKTFDD GTSDKKFSHI LIAGLARNPR MVTKGMSKAK 
VEKRSKQLKP FVKYINVRHV FPTRYVVDMD LKKAVDEADL VDAERKVDVK KGLKKLFYDR
YLNQKEVTSE KKSQGSSYFF QKLRF