| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_17772 |
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| Symbol | |
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| ID | 7196838 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1858805 |
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| End bp | 1862965 |
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| Gene Length | 4161 bp |
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| Protein Length | 1313 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177389 |
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| Protein GI | 219111275 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAAGCCATTC ATTCATTGTC ATCATTTTCG ACACCGATAC AAGTTGGAGA AACCATTCAC
CGTACAATGG AGACAATCGT ACATTATTAC CGAAAAACGG AGCCCCCGCA TTCCTTGTTT
CCCTCTATTA CAGAGGAGCT TAAGGTTTTA GGGCTCGGAG CGGACGGTAA CAAAATCGAG
GCGGTCGAGA CGGAGAGCTG TTTTAATGTT CTTCTGGGTA CGGAACTCGT CGCCGAGCAG
CAAGAGAAGT TGGAATGGCT GCTCGCGGAA ACTTTTGATC GCGATTCGCT TCAAATCGGA
AAGAGTTCTT TTGATACCAG CGTCGGAACG GACACTTGGA AAGTGGAGTT TGGCCCACGG
ATGACGTTTA CTTCGGCATT TTCGTCGAAC GCTGTAGGTA TCTGTCAAGC TTGCAACTTA
CCTATTTCTC GCCTGGAACT GTCTCGTCGC TACTTATTCA CTACAAGCGA GGCATTGTCG
GATGAAGCGA TAGTCGCAGT TAAAGCCATG CTGCACGATC GCATGACGGA GGAGGAGTAC
GCTGCTCCCT TGAAGTCGTT CGATAGTGGC GCTCATGCAA AGCCAGTTCG GACAATCCCC
ATCATGGCAG AGGGCCGAGG AGCCTTAGAA ATAATCAATA AGGAGATGGG TCTCGGATTT
GATGACTTTG ATTTGGATTA TTATACCAAT CTCTTCAAGG TAAGTGCGTT CGGTGCGAGT
TGTGTGAAAG CTGTATCAGC TTTAATTCAC ACGTCGAAAC ACCTGGTCTT TAGGAGAAAT
TGGGACGAGA TCCCACCGAC GTCGAGTGTT TCGACATGGG ACAGTCAAAC TCAGAACATT
CGCGCCACTG GTTCTTCAGC GGCAAGATGG TAATTGACGG GAAAGAGAAA CCTCATACGC
TTTTCCAAAT GGTCAAAGAC ACACTTCCCA AAGATATTCC CAACAACTCG ATCATTGCCT
TCCACGATAA CTCTTCTTCG ATTCGAGGGT ATGAGTGTAG CGCTCTTCGT CCTGTCTCGT
TGGACAGTGC AGGGCCAGTG CACGTGGGAA ATCAAACTTT GCATCCTATT TTGACGGCTG
AGACGCACAA CTTTCCCTCT GGTGTCGCCC CTTTTCCCGG TGCCGAAACA GGCACAGGCG
GTCGCCTTCG TGACGTGACG GCGACCGGCC GTGGTGCCTA TCCTGTGGCA GGAATCTCAT
CGTATTGTGT TGGAAACCTA CAAATCCCTG GATATGATTT GCCTTGGGAA GACAAGTCGT
TTGTGTACCC GAGTAATTTG GCATCGCCAC TCAACATTGA ACTTCGAGCC AGCGATGGTG
CATCGGACTA TGGAAACAAG TTTGGAGAGC CCGTCATCCA TGGATTTACC CGATCCTTCG
GACAGCGACT TTCGAATGGA GAACGTTTCG AGTGGGTCAA GCCGATAATG TTTTCAGCTG
GAGTTGGACA GCTCGACGGA GATCATACAA CCAAGGGAGC GCCTGAAAAA GGGATGCTAG
TCGTCAAGAT CGGAGGCCCA GCTTATCGTA TTGGAATTGG AGGGGGGGCT GCTTCTTCTC
GTGTACAGAG TGCGGAAAAT GCGGACTTAG ATTTTGATGC CGTTCAGCGC GGAGATGCTG
AAATGGAAAA TCGAATGAAT CGTCTAATGA GAGCGTGCTG CGATCTCGGT GAAAGAAACC
CAATAGTGTC AGTGCATGAT CAAGGAGCAG GAGGGAATGG AAATGTTCTC AAGGAAATTG
TAGAGCCTGC CGGAGCTTCA TACGATATTC GCAAGGTGAG TGGTCGCCAG AACTGAAAAT
TTTTTTCGTC TAGTTCTTAG GAAAACTCAA TATTCTTATT GTGATTCATT GCAGGTATAT
GTTGGGGATG AAACACTTTC GGTTCTTGAA ATATGGGGGG CAGAATATCA AGAGAATAAC
GCACTACTTA TTCGTCCTAC TGATCGAAAT TTGTTTGAAG CTATTGCCAA ACGCGAAAAT
TGCCCTGTCC GCATTCTAGG TGAGGTCACT GGAGATGGCA AGGTTGTCGT TCACGATTCG
AAAGACAATT CGACTCCTGT GGATCTTCCT CTTGAACTGG TTTTAGGGAA GATGCCTCAG
AAAACATTTG TCGATGATCA TATTGCGAAT AAGCTCGAGC CCTTACGCCT TCCTGAAACT
GCAACGGTGG CGTCCGCTTT GGATCGCGTT CTTCGATTGC TTTCAGTGGG ATCGAAACGA
TTCCTAGTGC ACAAAGTAGA TCGTTCGGTT ACCGGTCTTT GCGCACAGCA ACAATGCGTA
GGCCCTTTGC AACTGCCTTT GTCCAATGTA GGCGTCACAG CGCATACTCA TTTTGGAATC
ACAGGAACGG CTGTTGCGTG CGGCGAGCAA CCAATTAAGG GACTCGTGGA CTCTGCAGCT
ATGGCAAGGA TGACTGTGGC CGAGGCAATG ACTAACATAA TGTGGGCAAA GCTTTCGAAG
ATCGAGGATA TAAAAGCTAG TGGAAATTGG ATGTACGCTG CAAAACTTCC TGGTGAAGGT
GCTAAAATGT ACGATGCATG CGAAGCGCTA AGAGACGCCT TGCTTACTCT TGGTGTTGGA
ATCGATGGTG GTAAAGATTC TTTGTCAATG GCCGCAAGGT GCGGTAACGA GGTAGTTAAG
GCTCCAGGTG AGCTCACGAT GACCTGCTAC GTGACCTGCC CTGATATAAC GAAGACCGTC
ACACCTGACT TGAAATGTCC AAGCGGCGGG TCCACTTTAA TATACGTGGA TCTCGGGAAT
GGTAAGACGC GCCTCGGCGG ATCAGCACTT GCTCAGGTGT ACAGCCAAAT CGGTGACGAA
TCGCCTGATA TTGACGACTT TGGTGTGTTG AAAAATGCCA TGGTGGTGAC GCAAGATTTG
ATTGAGAAGC GCACTCTTCT TTCTGGGCAC GATCGGTCTG ATGGTGGCCT CATCGTCACT
CTAGTGGAAA TGGCAATCTC CGGTAATTGC GCCATTGACA TTGCACTACC GCCTGCCGGC
GCCAATGCTT TTGATGTCCT ATTCAACGAA GAAGCTGGCA TCGTTCTGGA AGTTTCTAAC
GAAGATGGAG GGGCCGTTAT GAAAGCTTAC GCGGATGTCA ACATACCCGT ATTCAAAATT
GGTACGGTTT CTTGTGGCGA CTCGATCAAG GTTTCAATTG GAAATGAGTC TCCCTGCATT
GACAGCAAGA TGACTGTGCT TCGTGATGTA TGGGAAGCAA CTTCGTTTCA ACTGGAGAAA
CGGCAGAGAA ATCCAAAATG CGTTCACCAG GAAGAAGTAG GTCTCAAACT ACGTCATGCA
CCACATTGGA AACTAACCTT TGAGCCACTT CCTACTGATA TTTCTATCAT GAACTCGACC
TCCAAACACA AGGTGGCGAT TATACGTCAG GAAGGAAGTA ATGGGGATCG AGAGATGATT
TCGGCGTTCT TGTCCGCGGG CTTTGAGTCT TGGGATGTCA CTGTCAGCGA TCTCTTAAGC
GGCTGTATTA CTCTCGACAT GTTTCGCGGT ATCGTTTTTG TCGGAGGCTT TTCGTTCGCT
GATGTCCTTG ATAGCGGAAA GGGATGGGCT GGTGTCATTA AATTCAACGA AAGCGTCTTT
CATCAGTTCC AGAAATTCCG AACCCGGAAG GACACGTTCA GCCTTGGTGT ATGTAACGGA
TGTCAACTTA TGGCGTTGCT CGGATGGATT CCGTCTACGG ATGGCTTGGT CGAAGAGAAT
CAGCCTCGCC TCTTGCACAA TGACAGTGGC AAGTTCGAAA GCCGCTTCTC GAGTGTCAAG
ATCCAGTCGA GCCCTGCTGT TATGTTCAAA GGAATGGAAG GCTCGTCTCT TGGGGTTTGG
GTGGCGCACG GAGAAGGCCG TTTCCATTTC CCTGACCCGT CTGTTCAAGA AATGGTGAAA
GAAAAGGACC TTGCCCCGCT TCGCTATGTG AACGATACAA ACGACGTAAC GCAAGAATAT
CCATTTAACC CGAATGGCAG TCCTGACGGT ATTGCCGCTC TTTGCTCGGA AGACGGACGC
CACCTTGCAT TGATGCCTCA CCCAGAACGT GTTTTCACGA CCTGGCAATG GCCCTGGACT
CCCGCAGAAT GGAAGGACTT TAAAGTTGGA CCATGGCTGC ATATGTTCCA GAACGCCCGC
ATCTTTTGCG ACGAAAACTA A
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| Protein sequence | METIVHYYRK TEPPHSLFPS ITEELKVLGL GADGNKIEAV ETESCFNVLL GTELVAEQQE
KLEWLLAETF DRDSLQIGKS SFDTSVGTDT WKVEFGPRMT FTSAFSSNAV GICQACNLPI
SRLELSRRYL FTTSEALSDE AIVAVKAMLH DRMTEEEYAA PLKSFDSGAH AKPVRTIPIM
AEGRGALEII NKEMGLGFDD FDLDYYTNLF KEKLGRDPTD VECFDMGQSN SEHSRHWFFS
GKMVIDGKEK PHTLFQMVKD TLPKDIPNNS IIAFHDNSSS IRGYECSALR PVSLDSAGPV
HVGNQTLHPI LTAETHNFPS GVAPFPGAET GTGGRLRDVT ATGRGAYPVA GISSYCVGNL
QIPGYDLPWE DKSFVYPSNL ASPLNIELRA SDGASDYGNK FGEPVIHGFT RSFGQRLSNG
ERFEWVKPIM FSAGVGQLDG DHTTKGAPEK GMLVVKIGGP AYRIGIGGGA ASSRVQSAEN
ADLDFDAVQR GDAEMENRMN RLMRACCDLG ERNPIVSVHD QGAGGNGNVL KEIVEPAGAS
YDIRKVYVGD ETLSVLEIWG AEYQENNALL IRPTDRNLFE AIAKRENCPV RILGEVTGDG
KVVVHDSKDN STPVDLPLEL VLGKMPQKTF VDDHIANKLE PLRLPETATV ASALDRVLRL
LSVGSKRFLV HKVDRSVTGL CAQQQCVGPL QLPLSNVGVT AHTHFGITGT AVACGEQPIK
GLVDSAAMAR MTVAEAMTNI MWAKLSKIED IKASGNWMYA AKLPGEGAKM YDACEALRDA
LLTLGVGIDG GKDSLSMAAR CGNEVVKAPG ELTMTCYVTC PDITKTVTPD LKCPSGGSTL
IYVDLGNGKT RLGGSALAQV YSQIGDESPD IDDFGVLKNA MVVTQDLIEK RTLLSGHDRS
DGGLIVTLVE MAISGNCAID IALPPAGANA FDVLFNEEAG IVLEVSNEDG GAVMKAYADV
NIPVFKIGTV SCGDSIKVSI GNESPCIDSK MTVLRDVWEA TSFQLEKRQR NPKCVHQEEV
GLKLRHAPHW KLTFEPLPTD ISIMNSTSKH KVAIIRQEGS NGDREMISAF LSAGFESWDV
TVSDLLSGCI TLDMFRGIVF VGGFSFADVL DSGKGWAGVI KFNESVFHQF QKFRTRKDTF
SLGVCNGCQL MALLGWIPST DGLVEENQPR LLHNDSGKFE SRFSSVKIQS SPAVMFKGME
GSSLGVWVAH GEGRFHFPDP SVQEMVKEKD LAPLRYVNDT NDVTQEYPFN PNGSPDGIAA
LCSEDGRHLA LMPHPERVFT TWQWPWTPAE WKDFKVGPWL HMFQNARIFC DEN
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