| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_17671 |
|---|
| Symbol | |
|---|
| ID | 7196196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 1614917 |
|---|
| End bp | 1616275 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177332 |
|---|
| Protein GI | 219111161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.659794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCTCAGCGT TTGTACCGTT CGAAATAAAT CTTGCTGCTG GTGACCATGA CGATTGCAAT
GACGATGTTT GCGGCAACAC AGGCAACGGC AAGACAGAAT TTGTTGGTCT GCGGCCGTCG
ATCTCTGTCT AACTTCTATT CACCGAAGCT GACGGAACGG CGAGTTGGAG AAGCTGGTTC
CGGCGGGCAT TCCTCCGAGG CCGGAGTCAA GGTGGCTCTC TTCGGAGCTT CGGGATTCTT
AGGAAATTAT GTTTGTGGTG AATTAGGTGC GTGTTTTTAT TTTCCACTAG CAACTATCGA
GTTGAACGAT TGCCAGTGGT TGCTCACGTC GGCGTACACT TTTCAGGAGC GAACGGTTTC
ATGGCGTATT TGGCAAATCG CGGAGACGAT ATGGAAATGC GTCACCTCAA GATTCCCTTC
GACCTCGGGC GTACACGCTT CCAGTTTTAC AGCCCCCGCG ATCGTGATTC CATCAAGGAA
GTCATTCAGG ATGCTGATGT CGTCGTCAAT ATGATCGGAA AATACTACGA GTCGGGGCAG
CCGATCCAGA CTGCCAAGTT TCCGTACGTT GGTTACCGTA CGAATTATTC GTTCGCGGAT
GCCAACGTAG AAATTCCTCG TACGCTGGCG GAAATCTGTC TCGAAATGCA AGTGGATCAC
TTCGTTCACG TCTCTTCGGC TTCGGCGTCT CCGGATGCTC GTTCGGAATG GTCCCGCACC
AAGTACGCTG GAGAGCAGGC CATCAAGGAA GTTTACCCCT GGGCGACCAT CATCCGTCCT
ACGCAGTTCT TTGGCAAACA GGATCGTTTC CTACATTGGT TCGCTCGTAT GGCGAAATGG
TACCGGATCG TACCACTCGT GGATGGGGGC AAGACCCTGA CGCAGCCCGT GTGGGCGGGA
GACGTGGCCA AGACTATTCT CAAGGTCTGC GACAATCCAT CCATCTTTGA AGGTCGCCAA
ATCGACTGCT TTGGTCCAGC CGAGTTTTCG TACAGCGAGT TGGCCGATTT TGTGAATGAT
ATCACGGAAC GGAACCGACC TGTTTTCAAT CTTCCGTACG ACTACTACGC CGCAATTGCC
AAGGTACTGC AGTACCAGCG CGATCCGCTC ATCACCCCAG ATTTAGTGGA AATATGGAGC
GAAGATTTTC TTCCCTCCAT GCCACCAGAA GAGTACAAGC TGCAGAAATA CGAACAGACC
AAGATCTTGA CCATGCAGGA TTTGGGCATT GAGCCTACTC CTATTGAGAA GATTGCTTTC
GAGTTTATGC AAATTTATCG CGCCGGAGGG CACTTTGCTC GTGTGCAAGG ATACCATTAA
AGACACCCTT CTATAACAAT AATAACCTGG TCGTCGCTC
|
|---|
| Protein sequence | MTIAMTMFAA TQATARQNLL VCGRRSLSNF YSPKLTERRV GEAGSGGHSS EAGVKVALFG
ASGFLGNYVC GELGANGFMA YLANRGDDME MRHLKIPFDL GRTRFQFYSP RDRDSIKEVI
QDADVVVNMI GKYYESGQPI QTAKFPYVGY RTNYSFADAN VEIPRTLAEI CLEMQVDHFV
HVSSASASPD ARSEWSRTKY AGEQAIKEVY PWATIIRPTQ FFGKQDRFLH WFARMAKWYR
IVPLVDGGKT LTQPVWAGDV AKTILKVCDN PSIFEGRQID CFGPAEFSYS ELADFVNDIT
ERNRPVFNLP YDYYAAIAKV LQYQRDPLIT PDLVEIWSED FLPSMPPEEY KLQKYEQTKI
LTMQDLGIEP TPIEKIAFEF MQIYRAGGHF ARVQGYH
|
|---|
| |