| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_17628 |
|---|
| Symbol | |
|---|
| ID | 7196529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 1425690 |
|---|
| End bp | 1427318 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176787 |
|---|
| Protein GI | 219110070 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTCTTCCTA CTAGTTACGC TACCTGTAGT CACTTTACCA GGATATAGCA ACATGGAGGA
ATCCTCCCCA GCCGACAATG ACAGCGAGCG ACCTTTGAAG AAGGCTCGCT TGGACAAAAC
GGAGCTTATG TCAGCCTCGA TACCTGTCGT GCCGCTTCCG GCGGAGCTCG CGTCCGTCGA
CTTTTCCCAG CGAATATCGT GGGATAAATA CCATCCATAC TCCGACATCC CTCTACCGTA
CACGCCCCTC GGCACCGCCC CCGCGTTCGT TCCTCTTCTC CCGCTCTCTG CCACCACGTT
CACGCTCTAT CGGGACGAGC CCGTGCCTGT ACGGTACACC TGCAGCCGCA ACCGGGACAA
CTACGATCCC GGCCATTGCC GACCCCCATG TTCATGCCCG TCGGTACAAA GGGCTGTCTC
AAAGGATTGG CGGTCCAGGA ACTCGTGACA GATCCCGCTC TATCCTGCCC AATAATTTTG
GGAAATACCT ACCACTTGGC CATACAGCCG GGGACTGAGT TAGTGGACGA AATGGGAGGA
CTCCACGCGT TTCAAGGTTT GCCGGAAACC TTGAACGGCG CACTGCACGA GCCCGATCCC
AACACCATAA CGACGACCAC ATCAGCCCAA CCCTATAACC TATTGACCGA CTCCGGGGGG
TTTCAAATGG TCTCGTTGGT CAAATTGTCT AAAATTACCG AAGAGGGAGT CTCGTTCCAA
AATCCGTTTC AAAAGCACAC CAACGCGGAC GATGTCAGCA GCATGTTGCT GTTGCGACCG
GAAGATTCCA TCCGACACCA AAACAACATT GGCGCGAATA TTATCATGGC CCTGGATGAC
GTCGTATCCA GTGTGATGGA AGACGAAGCC CGGTTTGTCA CGGCCACCCA CCGTACCCTG
CGGTGGTACG ATCGATGTGT AGCCGCCCAT GCGAAAGCCG ATACACAAAA TTTGTTTCCT
ATTGTCCAGG GCGGCTTGGA CATCGCCTTA GGTGGCAAGC GCGAACAATG CTTAGCAGGC
TTCCGTCACC GCGCGGTGAC CCAAGGATAC TGTATTCCGG GATACGCCAT TGGTGGCTTG
GCGGGAGGCG AATCCAAGGA CGATTTCTGG AGGGTCGTGG ATCATTGCTG CCGGGCGCTT
CCCGACGACA AACCCCGTTA CCTTATGGGT GTCGGATATC CCTTGGACTT GGTCGTTTGC
ACCGCGCTGG GTTGCGACCT GTACGATTGT GTCTACCCAA CGCGCACCGC CCGCTTTGGA
GTCGCACTTG TCCCAGGCCG GCATCCGGGA ACACTGCGAC TCAAGGCGCA CGAGTGTGCC
AGCGACACCG GACCGATCCA GGATGGCTGC GGATGTCAGG CGTGTCGGGA AGGTATATCC
CGTGCGCGTT TGCACCTTCT CCTCAAGACA AACAACCCGC TGGCGGCGGA ACTCGTGACA
CAGCACAACA TTGCCTATAT GATGACCTTG GTGCGGGACA TGCGCAACTC TATTCTGCGC
AACGAATTTG CCGCGTTCGC CTCCAACTTT GTGCAACAAC AATTTCCTGG AGAGAGACAG
GGTGGTGACG AGTGCCCCGC TTGGGTCAAG AATGCGTTGG AAGCAGCTGG TGTTGGCCTC
CTCAAATAG
|
|---|
| Protein sequence | MFMPVGTKGC LKGLAVQELV TDPALSCPII LGNTYHLAIQ PGTELVDEMG GLHAFQAQPY
NLLTDSGGFQ MVSLVKLSKI TEEGVSFQNP FQKHTNADDV SSMLLLRPED SIRHQNNIGA
NIIMALDDVV SSVMEDEARF VTATHRTLRW YDRCVAAHAK ADTQNLFPIV QGGLDIALGG
KREQCLAGFR HRAVTQGYCI PGYAIGGLAG GESKDDFWRV VDHCCRALPD DKPRYLMGVG
YPLDLVVCTA LGCDLYDCVY PTRTARFGVA LVPGRHPGTL RLKAHECASD TGPIQDGCGC
QACREGISRA RLHLLLKTNN PLAAELVTQH NIAYMMTLVR DMRNSILRNE FAAFASNFVQ
QQFPGERQGG DECPAWVKNA LEAAGVGLLK
|
|---|
| |