Gene PHATRDRAFT_17531 details

Gene Information

• Locus tag: PHATRDRAFT_17531
• ID: 7196166
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1170494
• End bp: 1171162
• Gene Length: 669 bp
• Protein Length: 193 aa
• GC content: 51%
• Product: fucoxanthin chlorophyll a/c protein
• Protein accession: XP_002176735
• Protein GI: 219109965

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACGTCACTTT GGTATCCTTT TTGACCATGA AGATCGCTAG TCTTTTCGCT ATCGTCGGCT 
CTGCCGCTGC CTTTGCACCG GCTTCCCAAA TTCATCGTGG ATCTTCGTCT CTTTCCGCCT 
GGAAGGACGA AACCGTCGTC GGAATAACCG CCCCTGTTGG GTTTTTTGAT CCCCTCGGTC 
TGTCCAAAGA CAAGAATGAT GAAACAATGG GTTACTACCG TGAATCCGAA TTGAAGCATG 
GTCGCGTTGC TATGGCTGCT TGTTTGGGAT GGTTCATCAC TGCTGGAGGT ACCCATCCCG 
CCTTTAACAG TGAGCTTTCC AGTGATCCTC TTGAGGCTGC CCGGCAGCTT CCGTTCGTCG 
CTTGGTTGCA GTTCATCCTT GGCTGCGGTG CCGTAGAGTG GCTAACGGAA CAGATTAAGA 
AGCGTCCCGG GTACGTCCCT GGTGATGTTC TCGGAGCATC GTACTGGGCT GACAACAGCG 
ACGAAGGATG GGTGGACTAC CAAAACAAGG AGCTGAACAA CGGACGACTT GCTATGCTTG 
CCATCGCAGG AATCTACGCC CAGGACATTC TCTTCAACAA CTACGGTGAC ATGCTTTTTA 
AGCGCTAGAT AGTACAAGAT CCTCATTTTG GTCCTTAATT TGACTTGCAG AGATATATTG 
ATCGCTCTT 

 

Protein sequence

MKIASLFAIV GSAAAFAPAS QIHRGSSSLS AWKDETVVGI TAPVGFFDPL GLSKDKNDET 
MGYYRESELK HGRVAMAACL GWFITAGGTH PAFNSELSSD PLEAARQLPF VAWLQFILGC 
GAVEWLTEQI KKRPGYVPGD VLGASYWADN SDEGWVDYQN KELNNGRLAM LAIAGIYAQD 
ILFNNYGDML FKR