Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17519 |
Symbol | |
ID | 7196159 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1135766 |
End bp | 1136510 |
Gene Length | 745 bp |
Protein Length | 143 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176729 |
Protein GI | 219109953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGTCCTCATT CCAGAGATTT TATCGCCAAC ATGCCCGAAG TACAATCAGT TCAAGTTTTT GGAAAGTGAG TGATCAGCAG TACGGAGGAG GAATATAGAG ACATTTCCCG ACCACGCTAT TGTGGGTGGA GGCTGTGGTT TTGTTACAGT TCGTACGGTG CTCCATTGTA CAGGTTTAGC ATAGGACTGC AGAGTCGATC GATAAGCCAA TCATCGTGAT ATCGTCCGCC GCTCTAGACA TGGTGAAATT GTACACTCGT CGTCTGACAC CAACATTCTT ACACTTCTTA CAGGAAAAAG ACCGCCACCG CGGTGGCCTT TGCCAAGCAG GGTCGCGGTC TCATCAAGGT CAACGGCCAG CCCATTGAGT TGATTCAACC CGAGTCTCTT CGTCTGAAGG TCTTTGAGCC CGTCTTGATT GTAGGACAGG AGAAATTTAG CAATATCGAC ATCCGCATCC GTGTCAAGGG CGGTGGTATT ACGGCGCAGA TTTACGCCAT TCGGGCGGCC ATTGCCAAAT CCATCGTGGC CTACCACGCC AAGTACGTGG ACGAACAATC CAAGAACGAA CTGCGAAAGA CGCTTATGGA GTACGACCGC AACATGCTGG TCAGTGATCC TCGTCGCTGC GAACCTAAAA AGTACGGAGG ACGAAGCGCC CGTGCCCGTT TCCAAAAATC GTACCGTTAG ACGATGGCCA CGGCTTTTTA AACAAACAAA CCAACCAACC ATTTACACCC CTGGA
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Protein sequence | MPEVQSVQVF GKKKTATAVA FAKQGRGLIK VNGQPIELIQ PESLRLKVFE PVLIVGQEKF SNIDIRIRVK GGGITAQIYA IRAAIAKSIV AYHAKYVDEQ SKNELRKTLM EYDRNMLVSD PRRCEPKKYG GRSARARFQK SYR
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