Gene PHATRDRAFT_17401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17401 
SymbolDHLTA_1 
ID7196333 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp775575 
End bp777280 
Gene Length1706 bp 
Protein Length492 aa 
Translation table 
GC content52% 
IMG OID 
Productdihydrolipoamide acetyltransferase 
Protein accessionXP_002177160 
Protein GI219110817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAATTTTAT TCCACACAGT CCGAGCAGTT TGTGTGGTTT TGGGGAAGAA CGAGACGGAT 
TCATTGGCGC AACCAAGATT TGGCTATTGG ACTTTGCCGA CTATCGACCA CTAGTACAGC
AAAAGTACAC AGTACAATCA ATGGCTTCCC GAACGCTCTG CCAACGTACT TGGCTGTTGG
CGAGCAAACG TCCGGCAGCT TGGTCGAATT CGGTGGGAAG ATCTACCGGT AGAGCGCCTT
CGCTGGAGCT TTTGGGAGGC TATCCAGTGC GCTTCTTCTC GAGTTATCCA CCTCATGAGT
TAGTAGGTCT ACCAAGTCTC TCACCGGTAA GACATCGTCC CATCAGTGAA AGAAGGGTTT
CTTTTTGTGT ATTTTCGGTT GCTCATTTCG ACAAGTATTC TTTTCTCTTC TAGACGATGG
AATCCGGATC CATCGCCGCT TGGAATCTCA AAGAAGGCGA GTCCTTCATT GCTGGTGATA
TTTTCTGCAG TGTAGAAACG GACAAGGCAA CCGTAGACTT TGAAGCACAG GACGATGGAG
TGTTGGCAAA GATTCTGGCA CAAGCCGGGC CCGACGAAAT CAAGTGCGGC GATCCCATTA
TGATCACCAT CGAAGACGAA GCCCATCTTG GGGCCTTTGC CGACTACACA CTCGACTCAG
GAACAGAGTC ATCACCACCA GTAGCGGATG CTGCCCCGAC CCCAACCGCA TCACCCCCCT
CTCCGAAATC TTCACCGGCC GAGAACAAGG GTACTCCGGA TGGGACGACG TCCGCCACGT
CACCAGATAC GGGTGATCGT ATCGTGGCGT CTCCTCTGGC CCATATGCTG GCGAAGGAAA
TGGGCTACAA TATTTCCAAG ATCCCAGGCA CCGGGCCAAA TGGGCGAATT ATTGCGGCGG
ACGTGAAAGA GTACACCCCG GGTGCCGTGG AAGATGCTGA TACAGTCGAC ACGCCGGCAC
CCGCTCAGGC GGCCATGAAA AGCTCCCCGG CGCAGCCTGT TTCCGGATCG GGATACACGG
ATTATCCCTT GTCCGAATCG GCCAGAGAAG TTGCCGCACG TTTGGCTCAA GCGAAACGCA
ACGTGCCGCA CTACTATCTA ACTGTAGATA TTGCGGTCGA CGAGCTCTTG AAAATTCGGT
CGACTTTGAA CGCCACCTTG GATGAGAGTG CCGCGCTCGG AGTATACGAG CTCTTGCTTA
AAGCCGCAGC GCTTTCCATG AAGGCGGTAC CCTCCGCAAA TGCTTCCTGG ATGGACAGTG
TCGTGCGTGT GTACGATTCG GTAGATATTA ATGTTGTTGT GGGTAGTGGT GATTCGCTCG
TGACTCCCGT TATTCAAAAT TGCTCCAGTA AAGGTCTCAA AGCGATTTCG GAAGAACTCG
GTTCTGCGGT AAAAGCCTTG GAAGAGGATG ACGATGCGCC TATTGGTGGC CTCGGAACGT
TCACGGTTAT GAACCTTGGT ATGTACGGCG TAAAGTCTTG TGCCCCGATT ATTCGGGAAC
CTCAAGCCTG CGCCCTGGCG ATTGGTGCTT TGGAAACACG AATTGTTCCT AACGACGACC
CCGATGCGGA AGATATTTAC AAGGAAAGTG TCATGTTTAC AGCGACACTC AGCTGTGATC
ATAGAGTGGT CGATGGAGCC GTTGGAGCGC AATGGCTACA GGCCTTCAAG TCACACGTTC
AAAATCCAAC CACACTCTTA CTCTGA
 
Protein sequence
MASRTLCQRT WLLASKRPAA WSNSVGRSTG RAPSLELLGG YPVRFFSSYP PHELVGLPSL 
SPTMESGSIA AWNLKEGESF IAGDIFCSVE TDKATVDFEA QDDGVLAKIL AQAGPDEIKC
GDPIMITIED EAHLGAFADY TLDSGTESSP PVADAAPTPT ASPPSPKSSP AENKGTPDGT
TSATSPDTGD RIVASPLAHM LAKEMGYNIS KIPGTGPNGR IIAADVKEYT PGAVEDADTV
DTPAPAQAAM KSSPAQPVSG SGYTDYPLSE SAREVAARLA QAKRNVPHYY LTVDIAVDEL
LKIRSTLNAT LDESAALGVY ELLLKAAALS MKAVPSANAS WMDSVVRVYD SVDINVVVGS
GDSLVTPVIQ NCSSKGLKAI SEELGSAVKA LEEDDDAPIG GLGTFTVMNL GMYGVKSCAP
IIREPQACAL AIGALETRIV PNDDPDAEDI YKESVMFTAT LSCDHRVVDG AVGAQWLQAF
KSHVQNPTTL LL