Gene PHATRDRAFT_17372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17372 
Symbol 
ID7196007 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp721805 
End bp722683 
Gene Length879 bp 
Protein Length149 aa 
Translation table 
GC content43% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177146 
Protein GI219110789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.909354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGGCCT TCGTTTGCCT GGGAGTATTT CACCAGCATG GCTTCAATTT CGTTATTGCC 
AGTTGCACTT CAAAACACCC TTCAACAGAT TATAATAAGG ACCAATCAAG CGGGCGCAGG
GATACGGGCG ATTCTGTTGT CAACTACTGA GGGAGTTCCG CTGGGACGCC TCTACGCCAC
AGATCAGCCT TTGAACGAAG ACGTGCTGGC ATCTATAGAA TCGGTATGGG CGCCGGCTTC
TAAGCAACTT CCAGTTCTTG GGCTGGAAAA AGCGCAACAA GTTACTGCGA TTTATGACCA
TGGGATTCTC ATTCATGTTT ATCAAACGCC AGTGGTAAGA TTCGAAAATG TCTATCCAAG
AATTTTAGAT TTTGTCACCC CCATCTTATG TGATTCTTTC TTCTACTATT AAGATAGTGA
CTATTCTTTG TAATCCCCAG TCAAACATTG GAGCTATACG CTCCAGCGGA ATCCCTTTAC
TCAAAGAAGT GCTTGAGCCT CTCTGCACAA CTCTCAACAA TTCACTCAGA CCTGATTATG
AAAGTGACCC AGTGTATCAA CAGTAGTTGC TTCCATTTCA GTTAATGAAG ACTTTCCGCC
CAAGTAATGT TACCTAAAGC TAACAGACAG GAATCTTTAT TTCGATGTTT GATAAAGTAC
AACAGGTATT TATCCATATT GGTAGTTCCT ATCCATCGCG AACTTTATAC TCGGGAGCGG
CGGATTGAAT AATCTTAAAC GTAAGCACAT TCCATGCTGC AGAAAGATCT TTTACTCGAG
AGAAAGCAAG TCAAACGGCC ACGAAAGTTC AAGATCTATG CATGGAGAGA TCTCCGTGAA
TAAAAGAGAT GTGTATTGAC GAGTCTAAAG TGAAATTAC
 
Protein sequence
MASISLLPVA LQNTLQQIII RTNQAGAGIR AILLSTTEGV PLGRLYATDQ PLNEDVLASI 
ESVWAPASKQ LPVLGLEKAQ QVTAIYDHGI LIHVYQTPVI VTILCNPQSN IGAIRSSGIP
LLKEVLEPLC TTLNNSLRPD YESDPVYQQ