Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17372 |
Symbol | |
ID | 7196007 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 721805 |
End bp | 722683 |
Gene Length | 879 bp |
Protein Length | 149 aa |
Translation table | |
GC content | 43% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177146 |
Protein GI | 219110789 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.909354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTGGCCT TCGTTTGCCT GGGAGTATTT CACCAGCATG GCTTCAATTT CGTTATTGCC AGTTGCACTT CAAAACACCC TTCAACAGAT TATAATAAGG ACCAATCAAG CGGGCGCAGG GATACGGGCG ATTCTGTTGT CAACTACTGA GGGAGTTCCG CTGGGACGCC TCTACGCCAC AGATCAGCCT TTGAACGAAG ACGTGCTGGC ATCTATAGAA TCGGTATGGG CGCCGGCTTC TAAGCAACTT CCAGTTCTTG GGCTGGAAAA AGCGCAACAA GTTACTGCGA TTTATGACCA TGGGATTCTC ATTCATGTTT ATCAAACGCC AGTGGTAAGA TTCGAAAATG TCTATCCAAG AATTTTAGAT TTTGTCACCC CCATCTTATG TGATTCTTTC TTCTACTATT AAGATAGTGA CTATTCTTTG TAATCCCCAG TCAAACATTG GAGCTATACG CTCCAGCGGA ATCCCTTTAC TCAAAGAAGT GCTTGAGCCT CTCTGCACAA CTCTCAACAA TTCACTCAGA CCTGATTATG AAAGTGACCC AGTGTATCAA CAGTAGTTGC TTCCATTTCA GTTAATGAAG ACTTTCCGCC CAAGTAATGT TACCTAAAGC TAACAGACAG GAATCTTTAT TTCGATGTTT GATAAAGTAC AACAGGTATT TATCCATATT GGTAGTTCCT ATCCATCGCG AACTTTATAC TCGGGAGCGG CGGATTGAAT AATCTTAAAC GTAAGCACAT TCCATGCTGC AGAAAGATCT TTTACTCGAG AGAAAGCAAG TCAAACGGCC ACGAAAGTTC AAGATCTATG CATGGAGAGA TCTCCGTGAA TAAAAGAGAT GTGTATTGAC GAGTCTAAAG TGAAATTAC
|
Protein sequence | MASISLLPVA LQNTLQQIII RTNQAGAGIR AILLSTTEGV PLGRLYATDQ PLNEDVLASI ESVWAPASKQ LPVLGLEKAQ QVTAIYDHGI LIHVYQTPVI VTILCNPQSN IGAIRSSGIP LLKEVLEPLC TTLNNSLRPD YESDPVYQQ
|
| |