Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17362 |
Symbol | |
ID | 7196315 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 703458 |
End bp | 704205 |
Gene Length | 748 bp |
Protein Length | 190 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177140 |
Protein GI | 219110777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.937042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTGGAAAGT ATTAGACCAG AATCTGAAGT AAACCTGCTA GAATGGTGGC GCTGTCGAGC AAGCTTGCTC TGGGAGCTGG TATGTAATCA CGATAGTTAT CACAATGGCA CAAGTGAATA CCACCAAGAT ATCACTCACG CGACCGCGTT CTTGTGTATT TATTATTAAC CTCAGGATGC TATTGGGGGA CTGAAAAGTT TATTGTAAAG GATTTTCAGA AGCAATACCC CGGGTCCATT AAAAATGCCA AGGTCGGTTT CATGAGCCCC GATCCAAACG CAATGGAAAA CCCCTCGTAC CGCCAAGTTT GTTCCGGGGC GACCGGCCAC GTGGAGGTTC TTTGGGTCGA ATTAAAAGAT CCCAGTACAA CGTTTGAGCC GTTGATTCGT TTCTTTTTCC AGTTTCACGA CCCCACTACT CTGAACTCAC AAGGAAATGA TGTTGGTACT CAATACGCTT CGGCCATATT TTGCGAAGAC GAGCCTCAGA AACGAATTGC GGAAAAGGTC AAAGCGGAAC TGCAAGACCT TCTGGATGCT GGTAAAATTA GTAACTACCG GTCCAACAAA GTCGAGACAA GTATAGTTGA TACCAACCCC TTTTTCCCAG CTCACGAGGA ACACCAAGCG TACCTCGATA AAAACCCTTC TGGATACTGC AATCACTTTT ACAGATTCAA AGCTTGGCCT TCGTCGAAAG ACGAACTCTA AGGAATCCTA AGATGTTAGC AGTCGTAGAT ACTCGTCG
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Protein sequence | MVALSSKLAL GAGCYWGTEK FIVKDFQKQY PGSIKNAKVG FMSPDPNAME NPSYRQVCSG ATGHVEVLWV ELKDPSTTFE PLIRFFFQFH DPTTLNSQGN DVGTQYASAI FCEDEPQKRI AEKVKAELQD LLDAGKISNY RSNKVETSIV DTNPFFPAHE EHQAYLDKNP SGYCNHFYRF KAWPSSKDEL
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