Gene PHATRDRAFT_17362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17362 
Symbol 
ID7196315 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp703458 
End bp704205 
Gene Length748 bp 
Protein Length190 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177140 
Protein GI219110777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.937042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTGGAAAGT ATTAGACCAG AATCTGAAGT AAACCTGCTA GAATGGTGGC GCTGTCGAGC 
AAGCTTGCTC TGGGAGCTGG TATGTAATCA CGATAGTTAT CACAATGGCA CAAGTGAATA
CCACCAAGAT ATCACTCACG CGACCGCGTT CTTGTGTATT TATTATTAAC CTCAGGATGC
TATTGGGGGA CTGAAAAGTT TATTGTAAAG GATTTTCAGA AGCAATACCC CGGGTCCATT
AAAAATGCCA AGGTCGGTTT CATGAGCCCC GATCCAAACG CAATGGAAAA CCCCTCGTAC
CGCCAAGTTT GTTCCGGGGC GACCGGCCAC GTGGAGGTTC TTTGGGTCGA ATTAAAAGAT
CCCAGTACAA CGTTTGAGCC GTTGATTCGT TTCTTTTTCC AGTTTCACGA CCCCACTACT
CTGAACTCAC AAGGAAATGA TGTTGGTACT CAATACGCTT CGGCCATATT TTGCGAAGAC
GAGCCTCAGA AACGAATTGC GGAAAAGGTC AAAGCGGAAC TGCAAGACCT TCTGGATGCT
GGTAAAATTA GTAACTACCG GTCCAACAAA GTCGAGACAA GTATAGTTGA TACCAACCCC
TTTTTCCCAG CTCACGAGGA ACACCAAGCG TACCTCGATA AAAACCCTTC TGGATACTGC
AATCACTTTT ACAGATTCAA AGCTTGGCCT TCGTCGAAAG ACGAACTCTA AGGAATCCTA
AGATGTTAGC AGTCGTAGAT ACTCGTCG
 
Protein sequence
MVALSSKLAL GAGCYWGTEK FIVKDFQKQY PGSIKNAKVG FMSPDPNAME NPSYRQVCSG 
ATGHVEVLWV ELKDPSTTFE PLIRFFFQFH DPTTLNSQGN DVGTQYASAI FCEDEPQKRI
AEKVKAELQD LLDAGKISNY RSNKVETSIV DTNPFFPAHE EHQAYLDKNP SGYCNHFYRF
KAWPSSKDEL