Gene PHATRDRAFT_17215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17215 
Symbol 
ID7196678 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp208570 
End bp209794 
Gene Length1225 bp 
Protein Length297 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177041 
Protein GI219110579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGCAGATCG TCGTCGTTCG ATCGAAAGTA AATTGCCCAC CTACTCTTTT CCAGCTTCAA 
CGGTCTCGCG AAAAGGCAAG CTTACAAAAG AACGACAGTT TATGTTGCGA CGCCGACAAG
TTGTGTTACA ATTTCTCCGG ATTTGCATGC TCCTACTTTT GTCCAGTATT CGTGCTTTCG
TTCGTCCTTT GTATCACCAA AAACCGTATA CTAGTCCCAC CAGAGCGTGC AGCAGTAGGA
TAGCAGCAGC AGCAGTAGCA GCAAAAACAG CGCTATGACA AATCTAGACG AGATCCTAGG
CACACGCTTG CAAATTCCGG TCGCGGACGC CATTGCGGTA CACGGTGACG AGAACGTCAA
GTTTGTTGAC GGCTCGTGGT GGCTACCGAA CCAAAACCGC AACGCTCGCC AAGAATTTGA
AATTGGTCCT CGCATTCGCG GCGCAATTTT TCTCGACATC GACGACGTTG CCAACAAGGG
CGCTTCCAGC AATCCGAAAA ATCTGCCGCA CATGATGCCA TCAGCGAAGC TGTTCAGTGC
CGCTATGGAT GCTATGTCGA TCGTCAACAA AGATCATTTG ATTGTGTACG GCCAAGAGGG
ATGTCCCTAC CTGCACCGTG CCTGGTATCA GTTCATCTGT ATGGGGCATG ATAACTCAAA
AGTTCACTTA TTGGAAGGTT CCTTTCAAGA TTGGGAAGAA GCCGACGGAC CCGTCGACAT
CTCCGCAAAG AACGTCATGA AAGTAGCCGA ATTGGACCTT TCCAATCCGA CTTCGTATAC
CGCCATCGAG GCACGAAATA TCATGGATAT GGATCGCGTT CGTCAGATTT GTGATAATAC
CAGTGAAGAG GATACTAACA ATGTAACCAT TGTCGATGCA CGCTCCCCGG ATCGCTTTTA
CGGCCGTGTC GACGAGCCTC GTCCCGGTCT CAGACTTGGT CACATGCCGG GTGCGAAAAA
CGTGTTTTTC ATGGATCTCT TGAATGCCAA CCATCCGTCG CAGCTCAAAG CCATAGCAGA
TTTAGAAAAG GTATTCTCAA AAGCTGGGGT AAATGTTTAC GGCTCGAACC GTATCGTGGC
GTCGTGTGGA AGTGGAGCAA CGGCGTGCAC CATAGTGGCG GCTCTGACAG CTTGCGGTCG
CGACCCGTCA ACTCTTTACG TGTATGATGG ATCGTGGACA GAATGGGGCG CCGATCCAGG
CGTGCCCATC ACAAAAGAAG ACTGA
 
Protein sequence
MTNLDEILGT RLQIPVADAI AVHGDENVKF VDGSWWLPNQ NRNARQEFEI GPRIRGAIFL 
DIDDVANKGA SSNPKNLPHM MPSAKLFSAA MDAMSIVNKD HLIVYGQEGC PYLHRAWYQF
ICMGHDNSKV HLLEGSFQDW EEADGPVDIS AKNARNIMDM DRVRQICDNT SEEDTNNVTI
VDARSPDRFY GRVDEPRPGL RLGHMPGAKN VFFMDLLNAN HPSQLKAIAD LEKVFSKAGV
NVYGSNRIVA SCGSGATACT IVAALTACGR DPSTLYVYDG SWTEWGADPG VPITKED