| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_17198 |
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| Symbol | |
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| ID | 7196045 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 167825 |
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| End bp | 171576 |
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| Gene Length | 3752 bp |
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| Protein Length | 1052 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176534 |
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| Protein GI | 219109559 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.847126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAAATCAAGC CAAACCGCTT CCCTTGTCGG TGCCTGTTGT GAGTGTCTAG TATCCGAGAC
GTTGACACAC TCACACTCGC CATGCGGATC GGTTTGGTCC CGATGACGCT GTTTTCTTTG
CTCGCGTCGT CCGTTTGCCA GAACCATAGA GGAACCGTCA CGGCCTTTTC GAATACTGCC
CGTACCTTGA CGCGTCGTTC CACCGTCGCT CGGAGTGCCA AAGGTAAGCG CGCCGGTGCT
TGTTGTCACC AAAGGATCGC ATCGGAAACC TTGAGAATAC TCATACGGGA TCCTCGCAAC
ACATTAATAT AGACGGCGGA GGCGGCGGCG CCAAGAAACC CAAGAATGCG TACGCTCCCA
CAATCGTCTT GCCCGAAACA GCTTTTTCCC AACGGGCCAA CGCGGTCATC CGCGAGCCCG
AGTTGCAAGC GCTCTGGAAA GAAACAAATT TGTACCACAA ACTCTCGTCG CAAGCGAAAG
AAGCCGGCGC CGAACGGTTC GTCTTGCACG ATGGACCGCC CTACGCCAAT GGCGATTTGC
ACTGCGGACA CGCACTCAAC AAAATTCTGA AGGATTTCAT CAACCGCAAA CAAATTCTCA
ACGGGAAACA GGTACACTAC ATTCCGGGTT GGGATTGCCA CGGTTTGCCC ATTGAACTCA
AAGTCCTGCA GACCATGAAA TCCAAAGAAC GCGAGGCGCT TACACCGGTC ACCTTGCGCG
AAAAGGCGGC AGAATTCGCC AAAGAAACGG TAGAAAAACA AAGCGTGGCC TTTCAAAGAT
ACGGAATCTT TGGCGACTTC GAGAAACCGT ACTTGACCTT GCAGCCAGAG TTTGAAGCCG
CACAAATTCG AGTCTTTGGA GAGATGTTCC AAAAAGGTTA CATTTTTCGG GGTCGAAAAC
CGGTACACTG GTCGCCGTCG TCACGGACAG CTCTGGCGGA AGCCGAATTG GAGTATCCGG
AAGGGCACGT ATCTAAGAGT ATTTATGTGG CCTTTAACGT TGATACCCCG TCGGAAGTCT
TGGCGTCGTT TCATTCCACC GAAGAGCCAC TCAAAGTGGC CATTTGGACC ACCACACCGT
GGACAATGCC GGCGAACATG GCCGTGGCCG TCAACCCAGA ATTGAGCTAC TCAGTCGTAC
AACACGAAAA GACAGGGAAA CTGCTAGTTG CCACAGACTT GGCGTCAAGC TTGGCTCGCA
AGTTTGATCT GCCAGAAGAC GAAACCTTAG ACATCCTCGC AACGTTTCCT GGAAAGGATC
TCGTTGGTAC CATCTACAAA CACCCAATGT ACGATCGAAA GTCTCCGGTA CTGGCGGGTG
GGGACTACAT TACGACTGAA TCGGGTACAG GTTTGGTACA TACTGCTCCG GGTCATGGAC
AGGAGGATTA CTTGACCGGT CTTAAGAACG GACTGGAGAT TCTGAGCCCG GTGGATGATG
TAGGAAAATT CACCATAGAA GCTGGCGAAA GATATGTTGG CATGCGTGTG CTCGCGGAAG
GAAATTTGGC AATGATTGAT GCATTGCAAG AAGCTGGCTC GCTGCTCAAA GCAGAAGATT
ACGGCCATAA ATACCCTTAC GATTGGCGAA CCAAAAAGCC GACCATCTTC CGTGCGACCG
ACCAGTGGTT TGCCAGTGTG GCAGGTTTCC GGGACCAGGC TTTGGACGCC GTCGAAAAGG
TAGGTGATGT GGTGGAACTA GCTGACAACA ATTAAAGCGG ATGACGAGCA CATTCAACTT
TTTGTCCAAT TACCAATTTG GTGAATGCGG AGAGAAATGA AACCGAGCTT TTTAACCCTG
ACGCTTAAGG CTGCTGCTTT AGGATCATCG ATCCTTTGTC GTGTTTGAAA TACTGACCAA
TGCGTGCGTT CGTTCTATTA GGTCAAATGG GTCCCTGAGG TTGGAAAGAA TCGTATTCGG
TCCTTCGTCG ATGGCCGTGG CGATTGGTGC ATTTCTCGTC AACGGTCGTG GGGTGTCCCT
ATTCCCGTCT TCTACGACAA AGCAACTGGG AAAGAAGTCC TACTGAACAA AGATACTTTG
GCACACGTTC AAACATTGTT TGCTGAGCAC GGCAGCGACT GCTGGTGGAA GATGGATGAG
AGCGAACTTC TTCCAGAGAA ATTTCGTGCG GAAGCCGATA AGTGGCAGAA GGGAACCGAT
ACAATGGATG TTTGGTTCGA CTCCGGTTCG AGTTGGGCTG GTGTAGCCCA GTCACGCGAC
GAACTCGCAT ATCCGGCCGA TATGTACCTG GAAGGAAGTG ATCAGCACCG GGGCTGGTTT
CAGAGTAGCT TGTTGACTAG TGTCGCAAAC AACAATATTG CCCCGTACAA GACTGTCCTC
ACGCACGGGT TTGTTTTGGA CGAAAAAGGT TTTAAAATGT CTAAATCTCT CGGGAATGTT
GTCGATCCTT TGAAGGTTAT CGAAGGAGGT AACAACAAAA AACAAGACCC AGCGTATGGG
GCTGATGTGC TTCGTTTATG GGTTGCCAAC AGCGACTACT CTGGTGATGT TTTGATTGGA
GACAACATTA TCAAGCAGAC TTTCGATAGT TATCGCAAAC TCCGAAACAC TGCTCGCTAT
CTAATCGGAA ACTTGGCCGA TTTTGTGCCG AGCGACTCAA CAGACAGCAA CGCTGTAGCC
TACGATGACC TTCCTTCCAT GGACAAGTGG ATGCTCGGGC GATTGAGCGC AGTGCTAAGA
ACTGTAAATG AAGCAATGGA CGATTTCCAA TACCAACGCG CAATTCAAGA GTTGCTTCGT
TTTGCTTCAG CTGATCTCTC TAACTTCTAC CTGGATGTTG CTAAGGATCG TCTCTATATC
TCGGCAATGG ATGATGCACG GCGACGAAGC TGTCAAACAG TTCTTTACGC GTGTTTAGAG
GGGTTCACTA AGGCCATCTC GCCAATTTTA CCACACATGG CGGAAGATAT ATGGCAAAAT
CTTCCCTACC AAAAATCGAC GGATAGTGTC TTCGAAGGGG GCTGGCCGAC AAATCTTATG
TCATATGCAG AATTTGATTC TCAGACCTGG GATCTAGTCC GTTTGGTAAG AGACGATGTC
AACAAGATGC TTGAGTCTGC TCGAAGTGAC AAGCTTGTTG GAGCGTCCCT TGATGCGGCT
GCCTACATAT ACGTTCCGGA TTCTGAGAAG AAAGCAATCT TGGAGAAGCT TGTTGGAGAT
GCAAGCCTTG TCGCTCCACC AGTCAAGACC AATGGTGTGG ATGAGCTTCG TACAGCTTTG
ATGCTGTCTC AAATCCATCT GGTTGAAAAT GAAAACGATG TTAGAGAGGC CTGCGAAGAC
AAGTATGTGT CTTCCAGAGA TACCTCGAGC GGCTGTATTG TCGGAGTGGG GAGGGCAGTT
GGAACGAAAT GTGCTCGTTG CTGGTTCTAC GATGAGGAAG TTGGAAACCA CAGTCTTACG
TACGCGGACG TTTGTCAAAG ATGCAATGAA GCCATTTCTA GTTGGGAAAA GAAGACTGGA
CAAGCTTTCG TGAAACCGGA AGAAACGGAA GCTGAGCAAC CTGTTGCATA AATTGAAATC
TGTAGGATAC ACAAATTCTT CATGTTGTTT GGTCGGAGTA AATACCAATC TACTCATGCA
AACACAATGA GTTGGTTCAA AAACGTGGCT ATTTTATTTT CTCTATTATA CAAAAAGCAA
ACGGGCTTCA GTCAAATCGA GTCTCTCGAT TGGGAACTGG AGCTTTGTAT TCGCTAACAT
CAACTTGACT AAAGCGTAAA TTTGCGTGCG TT
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| Protein sequence | MRIGLVPMTL FSLLASSVCQ NHRGTVTAFS NTARTLTRRS TVARSAKDGG GGGAKKPKNA
YAPTIVLPET AFSQRANAVI REPELQALWK ETNLYHKLSS QAKEAGAERF VLHDGPPYAN
GDLHCGHALN KILKDFINRK QILNGKQVHY IPGWDCHGLP IELKVLQTMK SKEREALTPV
TLREKAAEFA KETVEKQSVA FQRYGIFGDF EKPYLTLQPE FEAAQIRVFG EMFQKGYIFR
GRKPVHWSPS SRTALAEAEL EYPEGHVSKS IYVAFNVDTP SEVLASFHST EEPLKVAIWT
TTPWTMPANM AVAVNPELSY SVVQHEKTGK LLVATDLASS LARKFDLPED ETLDILATFP
GKDLVGTIYK HPMYDRKSPV LAGGDYITTE SGTGLVHTAP GHGQEDYLTG LKNGLEILSP
VDDVGKFTIE AGERYVGMRV LAEGNLAMID ALQEAGSLLK AEDYGHKYPY DWRTKKPTIF
RATDQWFASV AGFRDQALDA VEKVKWVPEV GKNRIRSFVD GRGDWCISRQ RSWGVPIPVF
YDKATGKEVL LNKDTLAHVQ TLFAEHGSDC WWKMDESELL PEKFRAEADK WQKGTDTMDV
WFDSGSSWAG VAQSRDELAY PADMYLEGSD QHRGWFQSSL LTSVANNNIA PYKTVLTHGF
VLDEKGFKMS KSLGNVVDPL KVIEGGNNKK QDPAYGADVL RLWVANSDYS GDVLIGDNII
KQTFDSYRKL RNTARYLIGN LADFVPSDST DSNAVAYDDL PSMDKWMLGR LSAVLRTVNE
AMDDFQYQRA IQELLRFASA DLSNFYLDVA KDRLYISAMD DARRRSCQTV LYACLEGFTK
AISPILPHMA EDIWQNLPYQ KSTDSVFEGG WPTNLMSYAE FDSQTWDLVR LVRDDVNKML
ESARSDKLVG ASLDAAAYIY VPDSEKKAIL EKLVGDASLV APPVKTNGVD ELRTALMLSQ
IHLVENENDV REACEDKYVS SRDTSSGCIV GVGRAVGTKC ARCWFYDEEV GNHSLTYADV
CQRCNEAISS WEKKTGQAFV KPEETEAEQP VA
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