Gene PHATRDRAFT_17172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17172 
Symbol 
ID7196029 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp113243 
End bp115131 
Gene Length1889 bp 
Protein Length551 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176526 
Protein GI219109543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.496601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATACACGT CGACCATGAA GTCGGTTTTG TGTGGAGTTA CGCTGGCTTG CGGTGGAATT 
TGGCAAGCCA ATTCGTTCAC CTTTCGTCCG CTACCCGTCA CGAGACCCGT TATTGGCTTG
TTGGCTACGT TGGATCGCGT CAATGAAAAG TCCACGGTGG AACCCTCCTC GGGGGATCCA
CAACTCCAGC CGATTCGGCG GTTGCGGCAA AACAAGAAGG AGCCTTTGAT TGCGATTGTG
GGACGTCCCA ATGTCGGGAA AAGCGCTTTG GTGAATCGTA TTGCGGGATC GCAGTCTGGT
GGTGCCATTG TGGCGGACGA AAGTGGAATT ACCCGGGATC GCACCTACCG TCCCGCCGAG
TTCCTCGGCG AGCGCTTCAT GATTGTGGAC ACGGGCGGTC TCGTATTTGA CGATGACGAA
AGCACACTCT TTGCCAAAGA GATTAGGGAA CAGGCTATGG TGGCGATTGA AGAGAGCGCG
GCAGTTATCA TGGTAGTCGA CGGTCAAACC GGACTGACCG GGATGGACTT GATGATTGCC
GAGTTTCTAC GCAAAGAAGT GGATATTCCC GTGCACGTGG CAGTGAACAA GTGCGAAAGT
GAGAAAACGG GTGCCATGTC CGCTGCCGAC TTTTGGGGAC TCGGATTGGG CGAGCCCTTT
CCGGTTTCGG CCCTCCACGG AGTAGGCACG GCCGAAATCA TGGAAACCAT ATTCGACTCG
ATTGCCGAGA AGAAGAGTGC CATTGAAGGC TTTGGAACCA AAGTCAAAAA GCTGAAAGAG
GCCAAGGGTA TCATGAAACA CAAAGGGCCT CTCCCTGGGG AAGACGAAAC AGATTATAAA
ATGCGAAAGT ACGGAATCGG TGATGCGGCT AAAAAGGTGG AAGAAAATTA TCAAGCAGCC
ATGGAAGCAT TTGATGCCGA GGACCGTCCC GAGGAGATAA ATATTGCCAT TATTGGTAGA
CCCAATGTCG GCAAGTCTTC CCTGTTGAAT TCCATCTTTG GGGACACACG TGCGATCGTG
TCTGAGATGG CTGGAACGAC ACGCGATTCG ATCGATGCCG TCATGGAACG TCCGCCACCG
CCCGGAAGTG ACGATCTGTC TACAATTTAC CGCTTCGTAG ACACGGCGGG TATTCGTCGG
AAAGGAAAGG TTGATTTTGG TCCCGAATTC TTCATGGTCA ATCGAGCACT CCGGGCGATT
CGACGTGCCG ATGTCGTCCT TCTTATTCTG GATGCCACTT CCGGTGTAGC CGAACAAGAT
CGTGTCTTGG CGCAGAAAAT TGCCGATGAT GGACGCGCAT GCGTGATCGT TTGCAACAAA
TGGGATGCTG TCGTTGATAA GGATTCAACA ACGTACGACA AGTCGGTCCA ATACTTTCGA
GAAGAATTGC CGATGATTCG TTGGGCCCCT ATCTTATTTA TCTCGGCTGC CACTGGGCAA
CGTGTTGGCA AGATATACAG CGCCATTGAC GGTGCCATCG AAGCTCATCG TAAACGGATA
AGCACGGCTA TTCTCAACGA AGTTTTGAGA GATGCTATTT TGTGGCAGCC ACCTCCGACA
CGCCGCAACG GGTCACAGGC GAAGATATAC TACTGCAACC AAGTGAGTAC GCGACCACCT
ACCGTCGTTG TTTTCTGCAA TGATCCCAAA CTGGTCAACG ACAATTACAG GCGTTACTTG
GATCGTAAGT TCCGTGAATC ACTGGATGGA TTTGAAGCGA CTCCCATTCG ATGGATTTTC
CGAGGCCGTC GTGTACGTGA TGTCATGAGG AATCGCTCCA TGAATGGAGA TCCCGGTGAC
GGTGGCACCG GCGTCAGTTT CCCCTTTCCC CATGCCGACT AACCATGTAA ATCAAACCAT
CTTTTATAAA TATTGATATT TGCTCCTTA
 
Protein sequence
MKSVLCGVTL ACGGIWQANS FTFRPLPVTR PVIGLLATLD RVNEKSTVEP SSGDPQLQPI 
RRLRQNKKEP LIAIVGRPNV GKSALVNRIA GSQSGGAIVA DESGITRDRT YRPAEFLGER
FMIVDTGGLV FDDDESTLFA KEIREQAMVA IEESAAVIMV VDGQTGLTGM DLMIAEFLRK
EVDIPVHVAV NKCESEKTGA MSAADFWGLG LGEPFPVSAL HGVGTAEIME TIFDSIAEKK
TFDAEDRPEE INIAIIGRPN VGKSSLLNSI FGDTRAIVSE MAGTTRDSID AVMERPPPPG
SDDLSTIYRF VDTAGIRRKG KVDFGPEFFM VNRALRAIRR ADVVLLILDA TSGVAEQDRV
LAQKIADDGR ACVIVCNKWD AVVDKDSTTY DKSVQYFREE LPMIRWAPIL FISAATGQRV
GKIYSAIDGA IEAHRKRIST AILNEVLRDA ILWQPPPTRR NGSQAKIYYC NQVSTRPPTV
VVFCNDPKLV NDNYRRYLDR KFRESLDGFE ATPIRWIFRG RRVRDVMRNR SMNGDPGDGG
TGVSFPFPHA D