Gene Tmz1t_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2360 
Symbol 
ID7094282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011667 
Strand
Start bp23714 
End bp24382 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID643701048 
Productprotein of unknown function DUF159 
Protein accessionYP_002364189 
Protein GI217980139 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value0.680503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0000951308 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGCGGAC GCTATGCGCT CTACGGTCCG GTCTCGCGTC TGCGCGAGGC CTTCGAGGCG 
GAGCCCGAGG GGTTCGAGTT CGAGCCGCGC TGGAACGCGG CGCCCATGCA GTGGCTGCCG
GTGGTGCGGC AGCGGCCGAA CGGCGAGCGG GCGATCCACC GCCTGCGCTG GGGCTTGGTG
CCGTCGTGGG CGAAGGACGA GGCGATCGCC ACGAAGCTGA TCAACGCGCG CGGCGAGTCG
GTCGCCGAGA AACCCTCGTT CCGGGCGGCG TTCCGCCGCC GGCGCTGCAT CGTGCCGGCG
AACGGTTTCT ACGAGTGGCA GCAGGTCGCC GGTGAAAAGC AGCCGTTCTA CATCCATCCG
GTCGGGGGCG AGTTTTTTGC GCTCGCCGGG CTGTGGGAGC GCTGGACGCG GCCGGTCGAT
GGCGAGGCGA TCGACACCTT CACGATTGTG ACCACCGAGG CCAATGCGGC GATGCGGCCG
CTGCACGACC GGATGCCGGT GATCCTGGCG CCGGGGGATT GGTGGGCGTG GCTGAACGGG
GCGACGGCGG TCGAGAAGGT GCAGGCGCTG GTGAGGCCGT GTCCCGAGGC GGCGCTTGCG
GCGTATGCGG TGGGGAAGGC GGTCGGCAAT GTCCGCAACG ACGGGGCGGG GCTGATACAG
CCGCTCTGA
 
Protein sequence
MCGRYALYGP VSRLREAFEA EPEGFEFEPR WNAAPMQWLP VVRQRPNGER AIHRLRWGLV 
PSWAKDEAIA TKLINARGES VAEKPSFRAA FRRRRCIVPA NGFYEWQQVA GEKQPFYIHP
VGGEFFALAG LWERWTRPVD GEAIDTFTIV TTEANAAMRP LHDRMPVILA PGDWWAWLNG
ATAVEKVQAL VRPCPEAALA AYAVGKAVGN VRNDGAGLIQ PL