| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2356 |
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| Symbol | |
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| ID | 7094278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011667 |
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| Strand | + |
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| Start bp | 20799 |
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| End bp | 21878 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643701044 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002364185 |
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| Protein GI | 217980135 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 0.337618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.0354802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC GCCAAGCCCC AGAAATCTTC CAGATCCCGC TCGACGACCT CGACCCGGCG
GGCCTGCCGC CGCGCGGCAC GCCCGAGTTC GAGCAGGCGG TGATCGGGCG CTACGCGCTC
GACTACGCGG CGCGGGGCTG GCAGGCCGTG GTGGCGGTCG ATGAGGGTTT CGTGCGCGTG
GTCGCGGTCC CCGAGCGCGG GGTCGAGCCG AAGGCCTACG TGCTGGGGCT GCTGCAAAAC
GGCTTCCTGG AGGATGCGCT GCCGGTGCTC GAGGCGCTCG ACGGCATGCT GGACGACGCC
GAGATCGCCT ACAGCCACGG GCTGTGCCTG TCCGAACTGA GGCGACCGGC AGAGGCGGTC
GCCCCGCTGC AGCGGGCGGT CGAACTCGAC CCCACGCACG CGAACGCGTT CATCGCGCTC
GGGGTAGCGT TCGCGCGCAC CGGGCGCGCC GACGAGGCCG CCGACGCGCT GCGCGACGCG
GTCAAGCTCG AGCCGGAGAA CGCCTTCGCC AAGCGCAACC TGGCGGCGGT GCTGATGCGT
TCCGGCCGGA CGGCCGAGGC GCTGCCGTTC TTCCGCCAGG CGGCGAGCCT CGCGCCGGCG
GATCCGGGGG CGCAGCTCGG GCTCGCGCAG TGCCTGGAAG AGCTCGGGCC CTCGCACGTG
AAGGAGGCGG CCGAGCAGTA CAAGGCGGTG GTCAAGCGTT TTCCCGAGCA CCAGGCGGGC
GAGATGGCCG AAGAGGCGCT CACGCGCATC GGGCAGGACG AGCTGCGCGC GGCGGTCGAC
GGCGGGCTGC GCATGGACGC GGTGATGTAC ATGCAGGCGG CGCTGGACCG CTTCGCCAAG
CTCGACCAGG CGAAGGTCGG GCAGATCGTG ATGGAGATCG CGCTGCTCGG CCGCAACGGG
CTCGAGATCA ACAAGCCGGC CGTGCGCTAC ACGCTCGAGA ACCTCGAGGG CGAGTTCTCC
GGGCTGGCCC TGCTGGCGTA CATGCACGTG GGGTTCCGGA TGTTCGACGC CAAGGGCGAC
GCCGGAACCG GGCTCGATCG CGAATACGAG GCGGCGGTGA AGATGCGCCG CGAGCGCTGA
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| Protein sequence | MTTRQAPEIF QIPLDDLDPA GLPPRGTPEF EQAVIGRYAL DYAARGWQAV VAVDEGFVRV
VAVPERGVEP KAYVLGLLQN GFLEDALPVL EALDGMLDDA EIAYSHGLCL SELRRPAEAV
APLQRAVELD PTHANAFIAL GVAFARTGRA DEAADALRDA VKLEPENAFA KRNLAAVLMR
SGRTAEALPF FRQAASLAPA DPGAQLGLAQ CLEELGPSHV KEAAEQYKAV VKRFPEHQAG
EMAEEALTRI GQDELRAAVD GGLRMDAVMY MQAALDRFAK LDQAKVGQIV MEIALLGRNG
LEINKPAVRY TLENLEGEFS GLALLAYMHV GFRMFDAKGD AGTGLDREYE AAVKMRRER
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