Gene Msil_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3771 
Symbol 
ID7090699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp4127847 
End bp4129061 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content64% 
IMG OID643467056 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002364015 
Protein GI217979868 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00886] nitrite extrusion protein (nitrite facilitator) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTA AGGAATTCTT CAAGGCAGGA CACCCCCCGA CGCTATTCGC CGCCTTTTTC 
TATTTCGACA TGGCGTTCAT GGTGTGGGTT CTGCTGGGAC CGCTCGGGGT GCAGATCGCC
GGCGATCTCG GGCTGAACGC CGGTCAGAAG GGGTTGATGG TCGCAATTCC GATCCTGGCC
GGCGCGCTGC TTCGCGTCGT CATGGGCGTG ATGGTTGATC GCATCAAGCC AAAGCTCACG
GGCGTGATCG GCCAGCTCAT CGTCATCGCC GGATTGCTCG TCGCCTGGTC TTTGGGAATT
TCGAGCTTTG GCGGCGTTCT GGCCCTTGGC GTGGTGCTGG GCGTCGCCGG CGCATCCTTC
GCCGTCGCCC TGCCGCTCGC CTCACGTTGG TATCCGCCGC AATATCAGGG GGTCGCGCTC
GGCATCGCTG GAGCCGGCAA TTCCGGCACG GTCCTCGCGG CCCTGTTTGC GCCGACGCTC
GCCGCCCATT TTGGCTGGAT CAACGTCATC GGCCTCGCCG CCATTCCGGT CGCTATCGCG
CTCGTCGTTT ATCTGTTGCT CGCCAAGGAC GCCCCGAACC AGCCTGCGCC GAAGTCCTTC
GCTGACTATG CGGCGGTGCT TAAACTGCCC GACGCCTGGT GGTTCATGTT TTTCTATTTC
GTGACATTCG GCGGTTTCTC CGGCCTTGCC TCGTCGCTGA CGATCTATTT CAACAGCGAA
TACGGGCTGA GCCCTGTTGC GGCTGGCTAT GCGACCGCGG CCTGCGTCTT CGCCGGATCG
CTGGTGCGGC CGATCGGCGG CGCGCTCGCC GATCGCACCG GCGGCGTTCG CGCCTTGACG
ATCATGTACT GCGTCGCGGC CGCCGCGCTG ACGATCGTTA GCTTTCGGCT GCCGCAAATG
GGCGCGGCGC TCGCCGTCTT CGTCGTCGCC ATGCTGGCGC TCGGCATGGG CAATGGCGCG
GTGTTTCAGC TTGTGCCGCA GCGTTTCCGG CATGAAATCG GCGTCATGAC CGGGCTTGTC
GGCATGACGG GCGGCGTCGG CGGCTTCTAT CTCGCCTCCA GTCTTGGCTA TTCGAAACAA
TTCACCGGAA CTTATCAGCT TGGCCTGCTT GTCTTCGCCA TTCTCGCCGT CTCGGCGCTG
ATCGGATTGA CCAGCATCAA GCGTCGCTGG CGCACCACAT GGGGCGCGGC GGGCATGGGC
GTCGCGCGGA TTTGA
 
Protein sequence
MIGKEFFKAG HPPTLFAAFF YFDMAFMVWV LLGPLGVQIA GDLGLNAGQK GLMVAIPILA 
GALLRVVMGV MVDRIKPKLT GVIGQLIVIA GLLVAWSLGI SSFGGVLALG VVLGVAGASF
AVALPLASRW YPPQYQGVAL GIAGAGNSGT VLAALFAPTL AAHFGWINVI GLAAIPVAIA
LVVYLLLAKD APNQPAPKSF ADYAAVLKLP DAWWFMFFYF VTFGGFSGLA SSLTIYFNSE
YGLSPVAAGY ATAACVFAGS LVRPIGGALA DRTGGVRALT IMYCVAAAAL TIVSFRLPQM
GAALAVFVVA MLALGMGNGA VFQLVPQRFR HEIGVMTGLV GMTGGVGGFY LASSLGYSKQ
FTGTYQLGLL VFAILAVSAL IGLTSIKRRW RTTWGAAGMG VARI