Gene Msil_3538 details

Gene Information

• Locus tag: Msil_3538
• Symbol: thrS
• ID: 7092395
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: -
• Start bp: 3887215
• End bp: 3889161
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643466829
• Product: threonyl-tRNA synthetase
• Protein accession: YP_002363789
• Protein GI: 217979642
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 0.211804
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGATG TTACCTTTCC CGATGGCGCC ACGCGTCAGT TTCCCGCCGG CGCAAGCGGG 
TTCGACATCG CCAAAGCCAT TTCCCCCTCG CTCGCCAAAC GCACGGTCGC CATGATCGTC 
GACGGCTCCC TAAGCGATCT CGCCGATCCC GTCCGCCACG GGGCGCGCGT GGAGTTCATC 
GGCCGCGAGG ATAAGCGCGC CCTTGAGCTC ATCCGCCACG ACGCCGCGCA TGTCCTCGCC 
GAAGCGGTGC AGACGCTCTA TCCGGGCACG CAAGTGACGA TCGGTCCCGT CATCGAGAAC 
GGGTTCTATT ACGATTTTTT CCGCAACGAG CCGTTCACGC CGGACGATTT TGCCGCCGTC 
GAAAAAAAAA TGGCCGAAAT CATCGCGCGC GACAGGCCCT TCACGAAGGA GGTCTGGAGC 
CGCGATCAGG CGCGCTCCTT CTTCGAGACA AGGGGCGAGG CGTTCAAGGT TGAACTCGTC 
GACTCTATTC CGGGCGACGA GGATCTGAAG ATCTACCGGC AGGGCGACTG GCTCGACCTC 
TGCCGCGGCC CGCATATGAC CTCAACCGGC AAGATCGGCG ACGCATTCAA GCTGATGAAG 
GTCGCCGGCG CCTATTGGCG CGGCGATTCG AACCGCCCCA TGCTGCAACG CATCTATGCG 
ACGGCCTTCG CCACGCGCGA GGAGCTCGCG GCCTATCTGA GGCAGATCGA GGAGGCCGAG 
AAGCGCGACC ATCGGCGGCT CGGGCGGGAA ATGGACCTGT TCCATTTTCA GGAGGAAGGC 
CCCGGCGCGA TCTTCTGGCA CCCCAAGGGC TGGACCCTGT TCCAGACCCT CATCGCCTAT 
ATGCGGCGAC GCATGGAGGC TGACGGCTAT CTCGAAGTGA ATACGCCGCA GGTGCTCGAC 
CGCGCCCTCT GGGAAACCTC CGGCCACTGG CAGACTTTTC GCGAACACAT GTTCCTTACC 
AAGACCGAGG ACGAGCGGAT CTTCGCGCTG AAGCCGATGA ACTGTCCCGG CCATGTGCAG 
ATCTTCAAGA ACGGCCTCAA ATCCTATCGC GACCTGCCGC TGAAGATCGG CGAGTTCGGC 
GTCGTGCATC GCTATGAGCC GTCCGGCGCG CTGCATGGGG TCATGCGGGT GCGCGCCTTC 
ACGCAGGATG ACGCGCATAT CTTCTGCACG GAAGATCAGA TCATGGCTGA GAGCCTCAAG 
GTCAATGATC TGATTCTCTC GATCTATCAA GACTTTGGCT TTGACGACGT CATTATCAAG 
CTCTCGACGC GCCCCGAAAA ACGCGTCGGC TCGGAAGAGG CCTGGGACAA GGCGGAGGCG 
GCCCTCGGCC GGGTCGTCGA CATGCTGGCG GCTGGAGGCG CGAAGACCGG CGTCAATCCC 
GGCGAGGGCG CGTTTTACGG TCCAAAGCTC GAATATACGC TACGCGACGC GATCGGCCGC 
GAATGGCAAT GCGGGACGAC GCAAGTCGAT TTCAATATGC CCGGCCGCTT CGGGGCCTTC 
TATATCGACG CCGACAGCGA CAAAAAGACG CCAGTCATGA TCCATCGCGC GATCTTCGGA 
TCGCTCGAAC GATTCACCGG CATTCTGATC GAGCATTTTT CAGGCAATCT GCCTTTGTGG 
CTGGCGCCGG TGCAGGTGAT CGTCGCGACG ATCACCCAGG ACGCCGACGA CTATGCGCTC 
GAAGTGGCGG CGGCGGCCCG CAAATACGGC CTGCGCGTCG AAGCGGATTT GCGCAACGAA 
AAGATCTCCT ACAAGATTAG GGAGCATTCC CTCGCCAAGA CGCCGGTGCT GATCGTCGTC 
GGCAAACGGG AGGGGCTGGA GCGCACTGTT TCGATTCGGC GGCTCGGCGC TTCCGATACG 
ACAAGTCTGA GCCTCGAGAC GGCGCTGGAG CGCCTCGCGG ACGAAGCAAC GCCGCCAGAT 
CTCAGGCGCC TTCGCAGCGC AGCATGA 

 

Protein sequence

MIDVTFPDGA TRQFPAGASG FDIAKAISPS LAKRTVAMIV DGSLSDLADP VRHGARVEFI 
GREDKRALEL IRHDAAHVLA EAVQTLYPGT QVTIGPVIEN GFYYDFFRNE PFTPDDFAAV 
EKKMAEIIAR DRPFTKEVWS RDQARSFFET RGEAFKVELV DSIPGDEDLK IYRQGDWLDL 
CRGPHMTSTG KIGDAFKLMK VAGAYWRGDS NRPMLQRIYA TAFATREELA AYLRQIEEAE 
KRDHRRLGRE MDLFHFQEEG PGAIFWHPKG WTLFQTLIAY MRRRMEADGY LEVNTPQVLD 
RALWETSGHW QTFREHMFLT KTEDERIFAL KPMNCPGHVQ IFKNGLKSYR DLPLKIGEFG 
VVHRYEPSGA LHGVMRVRAF TQDDAHIFCT EDQIMAESLK VNDLILSIYQ DFGFDDVIIK 
LSTRPEKRVG SEEAWDKAEA ALGRVVDMLA AGGAKTGVNP GEGAFYGPKL EYTLRDAIGR 
EWQCGTTQVD FNMPGRFGAF YIDADSDKKT PVMIHRAIFG SLERFTGILI EHFSGNLPLW 
LAPVQVIVAT ITQDADDYAL EVAAAARKYG LRVEADLRNE KISYKIREHS LAKTPVLIVV 
GKREGLERTV SIRRLGASDT TSLSLETALE RLADEATPPD LRRLRSAA